Evidence map›Paper›PMID 26687968›Full record

ArticleParasitology research2016

Molecular identification of the Cryptosporidium deer genotype in the Hokkaido sika deer (Cervus nippon yesoensis) in Hokkaido, Japan.

Satomi Kato, Yojiro Yanagawa, Ryota Matsuyama, Masatsugu Suzuki, Chihiro Sugimoto

Abstract read
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In one paragraph

Article in Parasitology research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Heliyon · 2024
    Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Prevalence and Characterization ofFrontiers in veterinary science · 2020
    Article
  8. Article
  9. Molecular characterization ofInternational journal for parasitology. Parasites and wildlife · 2019
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Satomi KatoResearch Center for Zoonosis Control, Hokkaido University, Sapporo, Hokkaido, 001-0620, Japan.
Yojiro YanagawaGraduate School of Veterinary Medicine, Hokkaido University, Sapporo, Hokkaido, 060-0818, Japan.
Ryota MatsuyamaThe United Graduate School of Veterinary Sciences, Gifu University, Gifu, Gifu, 501-1193, Japan.
Masatsugu SuzukiThe United Graduate School of Veterinary Sciences, Gifu University, Gifu, Gifu, 501-1193, Japan.
Chihiro SugimotoResearch Center for Zoonosis Control, Hokkaido University, Sapporo, Hokkaido, 001-0620, Japan. sugimoto@czc.hokudai.ac.jp.
Hokkaido University · JPGifu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The protozoan Cryptosporidium occurs in a wide range of animal species including many Cervidae species. Fecal samples collected from the Hokkaido sika deer (Cervus nippon yesoensis), a native deer of Hokkaido, in the central, western, and eastern areas of Hokkaido were examined by polymerase chain reaction (PCR) to detect infections with Cryptosporidium and for sequence analyses to reveal the molecular characteristics of the amplified DNA. DNA was extracted from 319 fecal samples and examined with PCR using primers for small-subunit ribosomal RNA (SSU-rRNA), actin, and 70-kDa heat shock protein (HSP70) gene loci. PCR-amplified fragments were sequenced and phylogenetic trees were created. In 319 fecal samples, 25 samples (7.8 %) were positive with SSU-rRNA PCR that were identified as the Cryptosporidium deer genotype. Among Cryptosporidium-positive samples, fawns showed higher prevalence (16.1 %) than yearlings (6.4 %) and adults (4.7 %). The result of Fisher's exact test showed a statistical significance in the prevalence of the Cryptosporidium deer genotype between fawn and other age groups. Sequence analyses with actin and HSP70 gene fragments confirmed the SSU-rRNA result, and there were no sequence diversities observed. The Cryptosporidium deer genotype appears to be the prevalent Cryptosporidium species in the wild sika deer in Hokkaido, Japan.

Indexed as

AnimalsCryptosporidiosisCryptosporidiumDeerGenotypeJapanPhylogenyPolymerase Chain ReactionRNA, RibosomalRNA, RibosomalActinCervus nippon yesoensisCryptosporidium deer genotypeHokkaido sika deerHSP70Phylogenetic analysisSSU-rRNA

Identifiers

PMID26687968
OpenAlexW2215606556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.