Evidence map›Paper›PMID 26687648›Full record

ArticleTumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine2016

PTEN and p16 genes as epigenetic biomarkers in oral squamous cell carcinoma (OSCC): a study on south Indian population.

P S Sushma, Kaiser Jamil, P Uday Kumar, U Satyanarayana, M Ramakrishna, B Triveni

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Article in Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Salivary Biomarkers for Oral Cancer Detection: Insights from Human DNA and RNA Analysis.Cardiovascular & hematological agents in medicinal chemistry · 2024
    Review
  5. Histone Modification on Parathyroid Tumors: A Review of Epigenetics.International journal of molecular sciences · 2022
    Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Roles of PTEN with DNA Repair in Parkinson's Disease.International journal of molecular sciences · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

P S SushmaDepartment of Pathology, National Institute of Nutrition (ICMR), Hyderabad, Telangana, India.
Kaiser JamilDepartment of Genetics, Bhagwan Mahavir Medical Research Centre, Hyderabad, 500004, Telangana, India. kj.bmmrc@gmail.com.
P Uday KumarDepartment of Pathology, National Institute of Nutrition (ICMR), Hyderabad, Telangana, India.
U SatyanarayanaDepartment of Biochemistry, Dr. Pinnamaneni Siddhartha Institute of Medical Sciences, Chinnoutpalli, Gannavaram, A.P, India.
M RamakrishnaMNJ Institute of Oncology and Regional Cancer Centre, Hyderabad, Telangana, India.
B TriveniMNJ Institute of Oncology and Regional Cancer Centre, Hyderabad, Telangana, India.
MNJ Institute Of Oncology and Regional Cancer Centre · INNational Institute of Nutrition · INSiddhartha Medical College · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phosphatase and tensin homolog (PTEN) and p16INK4a (p16) genes are tumor suppressor genes, associated with epigenetic alterations. PTEN and p16 promoter hypermethylation is a major epigenetic silencing mechanism leading to cancer. The cooperation between PTEN and p16 in pathogenesis of cancers suggest that their combination might be considered as potential molecular marker for specific subgroups of patients. Hence, the present study aimed to investigate whether PTEN and p16 promoter methylations were involved in oral squamous cell carcinoma (OSCC) in south Indian subjects. DNA methylation quantitative analyses of the two candidate tumor suppressor genes PTEN and p16 were performed by methylation-specific polymerase chain reaction (MSP). Fifty OSCC biopsy samples and their corresponding non-malignant portions as controls were studied comparatively. The methylation status was correlated with the clinical manifestations. Twelve out of 50 patients (24 %) were found to be methylated for PTEN gene, whereas methylation of the p16 gene occurred in 19 out of 50 cases (38 %). A statistically significant result was obtained (P = <0.0001 and 0.017) for both PTEN and p16 genes. PTEN and p16 promoter methylation may be the main mechanism leading to the low expression of PTEN and p16 genes indicating the progress of tumor development. Our data suggest that a low PTEN and p16 expression due to methylation may contribute to the cancer progression and could be useful for prognosis of OSCC. Therefore, analysis of promoter methylation in such genes may provide a biomarker valuable for early detection of oral cancer.

Indexed as

DNA MethylationGene Expression Regulation, NeoplasticGenes, p16AdultAgedBiomarkers, TumorBiopsyCarcinoma, Squamous CellCell Transformation, NeoplasticCyclin-Dependent Kinase Inhibitor p16DNA, NeoplasmEarly Detection of CancerFemaleHumansIndiaMaleBiomarkers, TumorCyclin-Dependent Kinase Inhibitor p16DNA, NeoplasmPTEN PhosphohydrolasePTEN protein, humanBiomarkersEpigeneticsMethylation-specific PCR (MSP)Oral squamous cell carcinoma (OSCC)p16PTEN

Identifiers

PMID26687648
OpenAlexW2203085884

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.