Evidence map›Paper›PMID 26687621›Full record

ArticleCurrent biology : CB2015

Cell-Specific Transcriptional Profiling of Ciliated Sensory Neurons Reveals Regulators of Behavior and Extracellular Vesicle Biogenesis.

Juan Wang, Rachel Kaletsky, Malan Silva, April Williams, Leonard A Haas, Rebecca J Androwski, Jessica N Landis, Cory Patrick, Alina Rashid, Dianaliz Santiago-Martinez and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 101 citations in OpenAlex.

  1. Article
  2. Whole-organism spatial transcriptomics at single-cell resolution inbioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Evolution of sensory systems underlies the emergence of predatory feeding behaviors in nematodes.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Journal of biosciences · 2025
    Review
  16. Glia Development and Function in the NematodeCold Spring Harbor perspectives in biology · 2024
    Review
  17. Review
  18. Article
  19. Extracellular vesicles.Genetics · 2024
    Review
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Juan WangDepartment of Genetics and Human Genetics Institute, Rutgers University, Piscataway, NJ 08854, USA.
Rachel KaletskyDepartment of Molecular Biology and Lewis Sigler Institute, Princeton University, Princeton, NJ 08544, USA.
Malan SilvaDepartment of Genetics and Human Genetics Institute, Rutgers University, Piscataway, NJ 08854, USA.
April WilliamsDepartment of Molecular Biology and Lewis Sigler Institute, Princeton University, Princeton, NJ 08544, USA.
Leonard A HaasDepartment of Genetics and Human Genetics Institute, Rutgers University, Piscataway, NJ 08854, USA.
Rebecca J AndrowskiDepartment of Genetics and Human Genetics Institute, Rutgers University, Piscataway, NJ 08854, USA.
Jessica N LandisDepartment of Molecular Biology and Lewis Sigler Institute, Princeton University, Princeton, NJ 08544, USA.
Cory PatrickDepartment of Genetics and Human Genetics Institute, Rutgers University, Piscataway, NJ 08854, USA.
Alina RashidDepartment of Genetics and Human Genetics Institute, Rutgers University, Piscataway, NJ 08854, USA.
Dianaliz Santiago-MartinezDepartment of Genetics and Human Genetics Institute, Rutgers University, Piscataway, NJ 08854, USA.
Maria Gravato-NobreDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Jonathan HodgkinDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
David H HallCenter for C. elegans Anatomy, Albert Einstein College of Medicine, 1410 Pelham Parkway, Bronx, NY 10461, USA.
Coleen T MurphyDepartment of Molecular Biology and Lewis Sigler Institute, Princeton University, Princeton, NJ 08544, USA.
Maureen M BarrDepartment of Genetics and Human Genetics Institute, Rutgers University, Piscataway, NJ 08854, USA. Electronic address: barr@dls.rutgers.edu.
Rutgers, The State University of New Jersey · USPrinceton University · USUniversity of Oxford · GBAlbert Einstein College of Medicine · US

Funding

Quantitavie and Computational Biology Graduate ProgramT32HG003284 · NHGRI · PRINCETON UNIVERSITY · PI Joshua Michael Akey, Stanislav Y. Shvartsman · 2004 to 2026
$9.9M
Polycystins, cilia, and extracellular vesicles in C. elegansR01DK059418 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI Maureen M Barr · 2001 to 2026
$9.9M
Center for C elegans AnatomyR24OD010943 · OD · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI DAVID H. HALL, Nathan Schroeder · 2012 to 2026
$9.6M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Toward the Tissue-ome: A Map of the C. elegans Cell-specific TranscriptomeDP1GM119167 · NIGMS · PRINCETON UNIVERSITY · PI MURPHY, COLEEN TARA · 2015 to 2019
$4.0M
Molecular Mechanisms Regulating Age-Related Cognitive Decline in C. elegansR01AG034446 · NIA · PRINCETON UNIVERSITY · PI MURPHY, COLEEN TARA · 2009 to 2019
$3.1M
Inter-University Doctoral Degree:Puerto Rico to RutgersR25GM058389 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI LANGER, JEROME ALAN, RIOS-VELAZQUEZ, CARLOS · 1998 to 2016
$3.0M
A Model for Nephronophthisis in Caenorhabditis elegansR01DK074746 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI BARR, MAUREEN M · 2006 to 2014
$2.3M
A Model for Nephronophthisis in Caenorhabditis elegansR56DK074746 · NIDDK · RUTGERS, THE STATE UNIV OF N.J. · PI BARR, MAUREEN M · 2009 to 2015
$467k
Medical Research Council MR/J001309/1NHGRI NIH HHS T32 HG003284NIA NIH HHS R01 AG034446NIDDK NIH HHS DK059418NIDDK NIH HHS DK074746NIDDK NIH HHS R01 DK059418NIDDK NIH HHS R01 DK074746NIDDK NIH HHS R56 DK074746NIGMS NIH HHS DP1 GM119167NIH HHS OD 010943NIH HHS P40 OD010440NIH HHS R24 OD010943
6 · The paper itself

Abstract

Cilia and extracellular vesicles (EVs) are signaling organelles [1]. Cilia act as cellular sensory antennae, with defects resulting in human ciliopathies. Cilia both release and bind to EVs [1]. EVs are sub-micron-sized particles released by cells and function in both short- and long-range intercellular communication. In C. elegans and mammals, the autosomal dominant polycystic kidney disease (ADPKD) gene products polycystin-1 and polycystin-2 localize to both cilia and EVs, act in the same genetic pathway, and function in a sensory capacity, suggesting ancient conservation [2]. A fundamental understanding of EV biology and the relationship between the polycystins, cilia, and EVs is lacking. To define properties of a ciliated EV-releasing cell, we performed RNA-seq on 27 GFP-labeled EV-releasing neurons (EVNs) isolated from adult C. elegans. We identified 335 significantly overrepresented genes, of which 61 were validated by GFP reporters. The EVN transcriptional profile uncovered new pathways controlling EV biogenesis and polycystin signaling and also identified EV cargo, which included an antimicrobial peptide and ASIC channel. Tumor-necrosis-associated factor (TRAF) homologs trf-1 and trf-2 and the p38 mitogen-activated protein kinase (MAPK) pmk-1 acted in polycystin-signaling pathways controlling male mating behaviors. pmk-1 was also required for EV biogenesis, independent of the innate immunity MAPK signaling cascade. This first high-resolution transcriptome profile of a subtype of ciliated sensory neurons isolated from adult animals reveals the functional components of an EVN.

Indexed as

Organelle BiogenesisAnimalsCaenorhabditis elegansExtracellular VesiclesFemaleGene Expression ProfilingMaleSensory Receptor CellsSexual Behavior, Animal

Identifiers

PMID26687621
PMCPMC4698341
OpenAlexW2193899089

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.