Evidence map›Paper›PMID 26687452›Full record

ArticleMicrobiologyOpen2016

White collar 1-induced photolyase expression contributes to UV-tolerance of Ustilago maydis.

Annika Brych, Judita Mascarenhas, Elaine Jaeger, Elzbieta Charkiewicz, Richard Pokorny, Michael Bölker, Gunther Doehlemann, Alfred Batschauer

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
7.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Photoreactivation Activities of Rad5, Rad16A and Rad16B HelpJournal of fungi (Basel, Switzerland) · 2024
    Article
  5. Review
  6. Divergent roles of Rad4 and Rad23 homologs inApplied and environmental microbiology · 2023
    Article
  7. Journal of fungi (Basel, Switzerland) · 2023
    Review
  8. Article
  9. Comparative Roles of Rad4A and Rad4B in Photoprotection ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. A light life together: photosensing in the plant microbiota.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2021
    Review
  15. Acid pH Strategy Adaptation throughJournal of fungi (Basel, Switzerland) · 2021
    Article
  16. Article
  17. Functional Characterization ofFrontiers in microbiology · 2020
    Article
  18. Article
  19. The Blue-Light PhotoreceptorApplied and environmental microbiology · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Annika BrychFaculty of Biology, Department of Plant Physiology and Photobiology, Philipps-University, Karl-von-Frisch-Str. 8, Marburg, 35032, Germany.
Judita MascarenhasFaculty of Biology, Department of Plant Physiology and Photobiology, Philipps-University, Karl-von-Frisch-Str. 8, Marburg, 35032, Germany.
Elaine JaegerFaculty of Biology, Department of Genetics, Philipps-University, Karl-von-Frisch-Str. 8, Marburg, 35032, Germany.
Elzbieta CharkiewiczFaculty of Biology, Department of Plant Physiology and Photobiology, Philipps-University, Karl-von-Frisch-Str. 8, Marburg, 35032, Germany.
Richard PokornyFaculty of Biology, Department of Plant Physiology and Photobiology, Philipps-University, Karl-von-Frisch-Str. 8, Marburg, 35032, Germany.
Michael BölkerFaculty of Biology, Department of Genetics, Philipps-University, Karl-von-Frisch-Str. 8, Marburg, 35032, Germany.
Gunther DoehlemannDepartment of Organismic Interactions, Max-Planck-Institute for Terrestrial Microbiology, Karl-von-Frisch-Str. 10, Marburg, 35043, Germany.
Alfred BatschauerFaculty of Biology, Department of Plant Physiology and Photobiology, Philipps-University, Karl-von-Frisch-Str. 8, Marburg, 35032, Germany.
Philipps University of Marburg · DEMax Planck Institute for Terrestrial Microbiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ustilago maydis is a phytopathogenic fungus causing corn smut disease. It also is known for its extreme tolerance to UV- and ionizing radiation. It has not been elucidated whether light-sensing proteins, and in particular photolyases play a role in its UV-tolerance. Based on homology analysis, U. maydis has 10 genes encoding putative light-responsive proteins. Four amongst these belong to the cryptochrome/photolyase family (CPF) and one represents a white collar 1 ortholog (wco1). Deletion mutants in the predicted cyclobutane pyrimidine dimer CPD- and (6-4)-photolyase were impaired in photoreactivation. In line with this, in vitro studies with recombinant CPF proteins demonstrated binding of the catalytic FAD cofactor, its photoreduction to fully reduced FADH(-) and repair activity for cyclobutane pyrimidine dimers (CPDs) or (6-4)-photoproducts, respectively. We also investigated the role of Wco1. Strikingly, transcriptional profiling showed 61 genes differentially expressed upon blue light exposure of wild-type, but only eight genes in the Δwco1 mutant. These results demonstrate that Wco1 is a functional blue light photoreceptor in U. maydis regulating expression of several genes including both photolyases. Finally, we show that the Δwco1 mutant is less tolerant against UV-B due to its incapability to induce photolyase expression.

Indexed as

Ultraviolet RaysAdaptation, BiologicalDeoxyribodipyrimidine Photo-LyaseFungal ProteinsGene Expression Regulation, FungalMultigene FamilyMutationProtein Interaction Domains and MotifsProtein TransportUstilagoDeoxyribodipyrimidine Photo-LyaseFungal ProteinsDNA-repairlight regulationphotolyaseU. maydisUV-tolerancewhite collar 1

Identifiers

PMID26687452
PMCPMC4831468
OpenAlexW2284179136

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.