Evidence map›Paper›PMID 26687240›Full record

ArticleGlycoconjugate journal2016

Glycoproteomic studies of IgE from a novel hyper IgE syndrome linked to PGM3 mutation.

Gang Wu, Paul G Hitchen, Maria Panico, Simon J North, Mohamed-Ridha Barbouche, Daniel Binet, Howard R Morris, Anne Dell, Stuart M Haslam

Open access · hybridAbstract read
In one paragraph

Article in Glycoconjugate journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Glycan Structures of Human Immunoglobulins and Their Roles.Advances in experimental medicine and biology · 2026
    Review
  3. Review
  4. Review
  5. ERBIN and phosphoglucomutase 3 deficiency.Current opinion in immunology · 2023
    Review
  6. Article
  7. Generation and Characterization of Native and Sialic Acid-Deficient IgE.International journal of molecular sciences · 2022
    Article
  8. Review
  9. Review
  10. Article
  11. Sweet Rules: Linking Glycosylation to Antibody Function.Experientia supplementum (2012) · 2021
    Review
  12. Review
  13. Receptor-destroying enzyme (RDE) fromThe Journal of biological chemistry · 2019
    Article
  14. Clinical implications of systematic phenotyping and exome sequencing in patients with primary antibody deficiency.Genetics in medicine : official journal of the American College of Medical Genetics · 2019
    Article
  15. IgE Glycosylation in Health and Disease.Current topics in microbiology and immunology · 2019
    Review
  16. Human hyper-IgE syndrome: singular or plural?Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Review
  17. Primary atopic disorders.The Journal of experimental medicine · 2018
    Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Gang WuDepartment of Life Sciences, Imperial College London, South Kensington Campus, London, SW7 2AZ, UK.
Paul G HitchenDepartment of Life Sciences, Imperial College London, South Kensington Campus, London, SW7 2AZ, UK.
Maria PanicoDepartment of Life Sciences, Imperial College London, South Kensington Campus, London, SW7 2AZ, UK.
Simon J NorthDepartment of Life Sciences, Imperial College London, South Kensington Campus, London, SW7 2AZ, UK.
Mohamed-Ridha BarboucheLaboratory of Immunopathology, Vaccinology and Molecular Genetics, Pasteur Institute of Tunis and University Tunis El Manar, Tunis, Tunisia.
Daniel BinetMS-RTC (Mass Spectrometry Research and Training Centre), Suite 3.1 Lido Medical Centre, St. Saviours Road, Jersey, JE2 7LA, UK.
Howard R MorrisDepartment of Life Sciences, Imperial College London, South Kensington Campus, London, SW7 2AZ, UK.
Anne DellDepartment of Life Sciences, Imperial College London, South Kensington Campus, London, SW7 2AZ, UK.
Stuart M HaslamDepartment of Life Sciences, Imperial College London, South Kensington Campus, London, SW7 2AZ, UK. s.haslam@imperial.ac.uk.
Imperial College London · GBTunis El Manar University · TNUniversity of Dundee · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F008309/1Biotechnology and Biological Sciences Research Council BB/K016164/1
6 · The paper itself

Abstract

Glycans serve as important regulators of antibody activities and half-lives. IgE is the most heavily glycosylated antibody, but in comparison to other antibodies little is known about its glycan structure function relationships. We therefore describe the site specific IgE glycosylation from a patient with a novel hyper IgE syndrome linked to mutations in PGM3, which is an enzyme involved in synthesizing UDP-GlcNAc, a sugar donor widely required for glycosylation. A two-step method was developed to prepare two IgE samples from less than 1 mL of serum collected from a patient with PGM3 mutation and a patient with atopic dermatitis as a control subject. Then, a glycoproteomic strategy was used to study the site-specific glycosylation. No glycosylation was found at Asn264, whilst high mannose glycans were only detected at Asn275, tri-antennary glycans were exclusively observed at Asn99 and Asn252, and non-fucosylated complex glycans were detected at Asn99. The results showed similar glycosylation profiles between the two IgE samples. These observations, together with previous knowledge of IgE glycosylation, imply that IgE glycosylation is similarly regulated among healthy control, allergy and PGM3 related hyper IgE syndrome.

Indexed as

MutationProtein Processing, Post-TranslationalBinding SitesGlycoproteinsGlycosylationHumansImmunoglobulin EJob SyndromeMass SpectrometryMolecular Diagnostic TechniquesPhosphoglucomutaseProteomeGlycoproteinsImmunoglobulin EPGM3 protein, humanPhosphoglucomutaseProteomeGlycoproteomicsHyper IgE SyndromeIgEPhosphoglucomutase 3

Identifiers

PMID26687240
PMCPMC4891365
OpenAlexW2202280080

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.