Evidence map›Paper›PMID 26686518›Full record

ArticleEnvironmental science and pollution research international2016

Biodegradability of HCH in agricultural soils from Guadeloupe (French West Indies): identification of the lin genes involved in the HCH degradation pathway.

L Laquitaine, A Durimel, L F de Alencastro, C Jean-Marius, O Gros, S Gaspard

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Environmental science and pollution research international, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 21 citations in OpenAlex.

  1. Genetic Analysis ofFrontiers in microbiology · 2020
    Article
  2. Article
  3. Degradation study of lindane by novel strainsBioresources and bioprocessing · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

L LaquitaineLaboratoire COVACHIM-M2E, EA 3592, Université des Antilles et de la Guyane, BP 250, 97157, Pointe à Pitre Cedex, Guadeloupe. laurent.laquitaine@univ-ag.fr.
A DurimelLaboratoire COVACHIM-M2E, EA 3592, Université des Antilles et de la Guyane, BP 250, 97157, Pointe à Pitre Cedex, Guadeloupe.
L F de AlencastroLaboratoire Central Environnemental (GR-CEL), Faculté de l'environnement naturel, architectural et construit (ENAC), Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
C Jean-MariusLaboratoire COVACHIM-M2E, EA 3592, Université des Antilles et de la Guyane, BP 250, 97157, Pointe à Pitre Cedex, Guadeloupe.
O GrosUMR UPMC-CNRS-IRD-MNHN, Systématique, Adaptation, Evolution, Equipe, Biologie de la Mangrove, Université des Antilles et de la Guyane, BP 592, 97159, Pointe à Pitre Cedex, Guadeloupe.
S GaspardLaboratoire COVACHIM-M2E, EA 3592, Université des Antilles et de la Guyane, BP 250, 97157, Pointe à Pitre Cedex, Guadeloupe.
Université des Antilles · GPÉcole Polytechnique Fédérale de Lausanne · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Banana has been a main agricultural product in the French West Indies (Guadeloupe and Martinique) since the 1960s. This crop requires the intensive use of pesticides to prevent attacks by insect pests. Chlorinated pesticides, such as hexachlorocyclohexane (HCH), chlordecone and dieldrin, were used until the beginning of the 1990s, resulting in a generalized diffuse contamination of the soil and water in the areas of banana production, hence the need to develop solutions for cleanup of the polluted sites. The aims of this work were (i) to assess lindane degradation in soil slurry microcosms treated with lindane at 10 mg/L and (ii) to detect the catabolic genes involved in the HCH degradation pathway. The soil slurry microcosm system showed a 40% lindane degradation efficiency at the end of a 30-day experiment. Lower lindane removal was also detected in the abiotic controls, probably caused by pesticide adsorption to soil particles. Indeed, the lindane concentration decreased from 6000 to 1330 ng/mL and from 800 to 340 ng/mL for the biotic and abiotic soils, respectively. Nevertheless, some of the genes involved in the HCH degradation pathway were amplified by polymerase chain reaction (PCR) from crude deoxyribonucleic acid (DNA) extracted from the Guadeloupe agricultural soil, suggesting that HCH degradation is probably mediated by bacteria closely related to the family Sphingomonadaceae.

Indexed as

Soil MicrobiologyAgricultureBiodegradation, EnvironmentalGuadeloupeHexachlorocyclohexaneInsecticidesMetabolic Networks and PathwaysSoil PollutantsSphingomonadaceaeHexachlorocyclohexaneInsecticidesSoil PollutantsLindane degradationlin genesSoil bacteriaSoil slurry microcosmSphingobium

Identifiers

PMID26686518
OpenAlexW2291514579

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.