Evidence map›Paper›PMID 26685190›Full record

ArticleJournal of experimental botany2016

Functional relationship between mTERF4 and GUN1 in retrograde signaling.

Xuwu Sun, Duorong Xu, Zhixin Liu, Tatjana Kleine, Dario Leister

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Mitochondrial ATP SynthaseInternational journal of molecular sciences · 2024
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. COE2 Is Required for the Root Foraging Response to Nitrogen Limitation.International journal of molecular sciences · 2022
    Article
  9. Article
  10. Review
  11. Retrograde Signaling: Understanding the Communication between Organelles.International journal of molecular sciences · 2020
    Review
  12. Article
  13. Frontiers in plant science · 2020
    Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xuwu SunPlant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-University Munich, 82152 Martinsried, Germany sun.xuwu@biologie.uni-muenchen.de.
Duorong XuPlant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-University Munich, 82152 Martinsried, Germany.
Zhixin LiuPlant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-University Munich, 82152 Martinsried, Germany.
Tatjana KleinePlant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-University Munich, 82152 Martinsried, Germany.
Dario LeisterPlant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-University Munich, 82152 Martinsried, Germany.
Ludwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plastid-to-nucleus retrograde signaling plays an important role in regulating the expression of photosynthesis-associated nuclear genes (PhANGs) in accordance with physiological demands on chloroplast biogenesis and function. Despite its fundamental importance, little is known about the molecular nature of the plastid gene expression (PGE)-dependent type of retrograde signaling. PGE is a multifaceted process, and several factors, including pentatricopeptide repeat (PPR) proteins, are involved in its regulation. The PPR protein GUN1 plays a central role in PGE-dependent retrograde signaling. In this study, we isolated a mutant exhibiting up-regulation of CHLOROPHYLL A/B-BINDING PROTEIN (CAB) under normal growth conditions (named coe1 for CAB overexpression 1). The coe1 mutant has a single-base mutation in the gene for mitochondrial transcription termination factor 4 (mTERF4)/BSM/RUG2, which plays a role in regulating the processing of certain plastid transcripts. Defects in GUN1 or mTERF4 de-repressed the expression of specific plastid mRNAs in the presence of lincomycin (LIN). In wild-type plants, treatment with LIN or spectinomycin (SPE) inhibited processing of plastid transcripts. Comparative analysis revealed that in gun1 and coe1/mterf4, but not in wild-type, gun4, or gun5 plants, the processing of plastid transcripts and expression levels of Lhcb1 mRNA were affected in opposite ways when plants were grown in the presence of LIN or SPE. In addition, the coe1 mutation affected the intracellular accumulation and distribution of GUN1, as well as its plastid signaling activity. Taken together, these results suggest that GUN1 and COE1 cooperate in PGE and retrograde signaling.

Indexed as

Gene Expression Regulation, PlantSignal TransductionArabidopsisArabidopsis ProteinsDNA-Binding ProteinsLight-Harvesting Protein ComplexesPhotosystem II Protein ComplexPlastidsTranscription FactorsArabidopsis ProteinsCAB1 protein, ArabidopsisDNA-Binding ProteinsGUN1 protein, ArabidopsisLight-Harvesting Protein ComplexesmTERF4 protein, ArabidopsisPhotosystem II Protein ComplexTranscription FactorsChloroplastGUN1mTERF4/COE1PGEretrograde signaling.

Identifiers

PMID26685190
PMCPMC4915522
OpenAlexW2248325513

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.