Evidence map›Paper›PMID 26684294›Full record

ArticleThe Journal of allergy and clinical immunology2016

Ten-eleven translocation 1 (TET1) methylation is associated with childhood asthma and traffic-related air pollution.

Hari K Somineni, Xue Zhang, Jocelyn M Biagini Myers, Melinda Butsch Kovacic, Ashley Ulm, Noelle Jurcak, Patrick H Ryan, Gurjit K Khurana Hershey, Hong Ji

Open access · greenAbstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed, 3 pooled it
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 3 syntheses or guidelines pooled it, 134 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. MidbrainbioRxiv : the preprint server for biology · 2026
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  13. SilencingEnvironmental epigenetics · 2025
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  19. Epigenetic Reprogramming Drives Epithelial Disruption in Chronic Obstructive Pulmonary Disease.American journal of respiratory cell and molecular biology · 2024
    Article
  20. Review

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Hari K SomineniDivision of Asthma Research, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Xue ZhangDivision of Human Genetics, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Jocelyn M Biagini MyersDivision of Asthma Research, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Melinda Butsch KovacicDivision of Asthma Research, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio; Division of Biostatistics and Epidemiology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio; Department of Environmental Health, University of Cincinnati, Cincinnati, Ohio.
Ashley UlmDivision of Asthma Research, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Noelle JurcakSchool of Medicine, Johns Hopkins University, Baltimore, Md.
Patrick H RyanDivision of Biostatistics and Epidemiology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio; Department of Environmental Health, University of Cincinnati, Cincinnati, Ohio.
Gurjit K Khurana HersheyDivision of Asthma Research, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Hong JiDivision of Asthma Research, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio. Electronic address: Hong.Ji@cchmc.org.
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati · USJohns Hopkins University · US

Funding

LCenter for Clinical and Translational Science and TrainingUL1TR001425 · NCATS · UNIVERSITY OF CINCINNATI · PI HEUBI, JAMES E., KISSELA, BRETT M · 2015 to 2024
$37.5M
REPRODUCTIVE AND DEVELOPMENTAL TOXICOLOGY RESEARCHP30ES006096 · NIEHS · UNIVERSITY OF CINCINNATI · PI PINNEY, SUSAN MENGEL · 1992 to 2022
$35.4M
TSLP, IL-9-producing mucosal mast cells, and allergic inflammationU19AI070235 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI Marc E. Rothenberg · 2006 to 2026
$31.3M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR026314 · NCRR · UNIVERSITY OF CINCINNATI · PI HEUBI, JAMES E. · 2009 to 2011
$14.3M
The role of TET1 in childhood asthmaR21AI119236 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI JI, HONG · 2015 to 2016
$429k
DNA methylation in children hospitalized with asthma exacerbationR21AI101375 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI JI, HONG · 2012 to 2013
$409k
Exposure-induced Systemic Oxidative Stress in Children with AsthmaR21ES016830 · NIEHS · CINCINNATI CHILDRENS HOSP MED CTR · PI BUTSCHKOVACIC, MELINDA SUE · 2009 to 2010
$403k
NCATS NIH HHS UL1 TR001425NCRR NIH HHS UL1 RR026314NCRR NIH HHS UL1-RR026314-01NIAID NIH HHS 2U19AI70235NIAID NIH HHS R21 AI101375NIAID NIH HHS R21AI101375NIAID NIH HHS R21 AI119236NIAID NIH HHS R21AI119236NIAID NIH HHS U19 AI070235NIEHS NIH HHS ES016830-01A1NIEHS NIH HHS P30 ES006096NIEHS NIH HHS P30-ES006096NIEHS NIH HHS R21 ES016830
6 · The paper itself

Abstract

backgroundAsthma is a complex disorder influenced by genetics and the environment. Recent findings have linked abnormal DNA methylation in T cells with asthma; however, the potential dysregulation of methylation in airway epithelial cells is unknown. Studies of mouse models of asthma have observed greater levels of 5-hydroxymethylcytosine (5-hmC) and ten-eleven translocation 1 (TET1) expression in lungs. TET proteins are known to catalyze methylation through modification of 5-methylcytosine to 5-hmC.

objectiveWe sought to examine the association of TET1 methylation with asthma and traffic-related air pollution (TRAP).

methodsTET1 methylation levels from DNA derived from nasal airway epithelial cells collected from 12 African American children with physician-diagnosed asthma and their nonasthmatic siblings were measured by using Illumina 450K arrays. Regions of interest were verified by means of locus-specific pyrosequencing in 35 sibling pairs and replicated in an independent population (n = 186). Exposure to TRAP in participants' early life and at current home addresses was estimated by using a land-use regression model. Methylation studies in saliva, PBMCs, and human bronchial epithelial cells were done to support our findings.

resultsLoss of methylation at a single CpG site in the TET1 promoter (cg23602092) and increased global 5-hmC levels were significantly associated with asthma. In contrast, TRAP exposure at participants' current homes significantly increased methylation at the same site. Patterns were consistent across tissue sample types. 5-Aza-2'-deoxycytidine and diesel exhaust particle exposure in human bronchial epithelial cells was associated with altered TET1 methylation and expression and global 5-hmC levels.

conclusionsOur findings suggest a possible role of TET1 methylation in asthmatic patients and response to TRAP.

Indexed as

DNA MethylationVehicle Emissions5-MethylcytosineAdolescentAir PollutionAllelesAsthmaCase-Control StudiesChildCpG IslandsCytosineDNA-Binding ProteinsEpigenesis, GeneticEpithelial CellsFemaleGene Expression5-hydroxymethylcytosine5-MethylcytosineCytosineDNA-Binding ProteinsMixed Function OxygenasesProto-Oncogene ProteinsRNA, MessengerTET1 protein, humanVehicle Emissions5-hmCasthmacross-tissue markerDNA methylationnasal epithelial cellsTET1traffic-related air pollution

Identifiers

PMID26684294
PMCPMC4783231
OpenAlexW2194063385

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.