Evidence map›Paper›PMID 26683614›Full record

ArticleCell stress & chaperones2016

Cloning HSP70 and HSP90 genes of kaluga (Huso dauricus) and the effects of temperature and salinity stress on their gene expression.

Guogan Peng, Wen Zhao, Zhenguang Shi, Huirong Chen, Yang Liu, Jie Wei, Fengying Gao

Open access · bronzeAbstract read
In one paragraph

Article in Cell stress & chaperones, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  6. Review
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  8. Article
  9. Seasonal variation in the expression pattern of heat shock protein 70 and 90 in Common carp (Veterinary research forum : an international quarterly journal · 2023
    Article
  10. Article
  11. Article
  12. Frontiers in physiology · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Guogan PengCollege of Fisheries and Life Science, Dalian Ocean University, No.52 Heishijiao Street, Shahekou district, Dalian, 116023, Liaoning, People's Republic of China.
Wen ZhaoCollege of Fisheries and Life Science, Dalian Ocean University, No.52 Heishijiao Street, Shahekou district, Dalian, 116023, Liaoning, People's Republic of China. zhaowen_1963@163.com.
Zhenguang ShiCollege of Fisheries and Life Science, Dalian Ocean University, No.52 Heishijiao Street, Shahekou district, Dalian, 116023, Liaoning, People's Republic of China.
Huirong ChenCollege of Fisheries and Life Science, Dalian Ocean University, No.52 Heishijiao Street, Shahekou district, Dalian, 116023, Liaoning, People's Republic of China.
Yang LiuCollege of Fisheries and Life Science, Dalian Ocean University, No.52 Heishijiao Street, Shahekou district, Dalian, 116023, Liaoning, People's Republic of China.
Jie WeiCollege of Fisheries and Life Science, Dalian Ocean University, No.52 Heishijiao Street, Shahekou district, Dalian, 116023, Liaoning, People's Republic of China.
Fengying GaoCollege of Fisheries and Life Science, Dalian Ocean University, No.52 Heishijiao Street, Shahekou district, Dalian, 116023, Liaoning, People's Republic of China.
Dalian Ocean University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genes encoding HSP70 and HSP90 proteins were isolated from kaluga by homologous cloning and rapid amplification of complementary DNA (cDNA) ends (RACE). HSP70 (GenBank accession no. KP050541) and HSP90 (GenBank accession no. KP050542) cDNAs were composed of 2275 and 2718 bp and encoded polypeptides of 650 and 725 amino acids, respectively. Basic Local Alignment Search Tool (BLAST) analysis showed that HSP70 and HSP90 of kaluga shared high identities with those of Acipenser ruthenus, Acipenser schrenckii, and Acipenser baerii (98-99 %). Fluorescent real-time RT-PCR under unstressed conditions revealed that HSP70 and HSP90 were expressed in 11 different tissues of kaluga. Messenger RNA (mRNA) expressions of both HSP70 and HSP90 were highest in the intestine and lowest in the muscle. In addition, the patterns of mRNA expression of HSP70 and HSP90 were similar, although the level of expression was more in HSP90 than in HSP70 (P < 0.05).We also analyzed patterns of HSP70 and HSP90 expression in the muscle, gill, and liver of kaluga under different combinations of temperature and salinity stress, including temperatures of 4,10, 25, and 28 °C at 0 ppt salinity, and salinities of 10, 20, 30, and 40 ppt at 16 °C, where 16 °C at 0 ppt (parts per thousand) served as the control. We found that levels of mRNA expression of both HSP70 and HSP90 were highest at 4 °C in the muscle, gill, and liver and changed little with salinity stress. These results increase understanding of the mechanisms of stress response of cold freshwater fish.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCloning, MolecularCold-Shock ResponseCold TemperatureFishesFish ProteinsGene Expression RegulationHSP70 Heat-Shock ProteinsHSP90 Heat-Shock ProteinsPhylogenySalinityStress, PhysiologicalFish ProteinsHSP70 Heat-Shock ProteinsHSP90 Heat-Shock ProteinsCloning and expressionHSP70HSP90Kaluga (Huso duricus)SalinityTemperature

Identifiers

PMID26683614
PMCPMC4786522
OpenAlexW2465948890

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.