Evidence map›Paper›PMID 26682851›Full record

ArticleApplied and environmental microbiology2016

Genetic Analysis Reveals the Essential Role of Nitrogen Phosphotransferase System Components in Sinorhizobium fredii CCBAU 45436 Symbioses with Soybean and Pigeonpea Plants.

Yue Zhen Li, Dan Wang, Xue Ying Feng, Jian Jiao, Wen Xin Chen, Chang Fu Tian

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The PTSmBio · 2022
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  9. mBio · 2021
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  11. Global control of bacterial nitrogen and carbon metabolism by a PTSProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yue Zhen LiState Key Laboratory of Agrobiotechnology, College of Biological Sciences, and Rhizobium Research Center, China Agricultural University, Beijing, ChinaUniversity of Wisconsin-Madison.
Dan WangState Key Laboratory of Agrobiotechnology, College of Biological Sciences, and Rhizobium Research Center, China Agricultural University, Beijing, ChinaUniversity of Wisconsin-Madison.
Xue Ying FengState Key Laboratory of Agrobiotechnology, College of Biological Sciences, and Rhizobium Research Center, China Agricultural University, Beijing, ChinaUniversity of Wisconsin-Madison.
Jian JiaoState Key Laboratory of Agrobiotechnology, College of Biological Sciences, and Rhizobium Research Center, China Agricultural University, Beijing, ChinaUniversity of Wisconsin-Madison.
Wen Xin ChenState Key Laboratory of Agrobiotechnology, College of Biological Sciences, and Rhizobium Research Center, China Agricultural University, Beijing, ChinaUniversity of Wisconsin-Madison.
Chang Fu TianState Key Laboratory of Agrobiotechnology, College of Biological Sciences, and Rhizobium Research Center, China Agricultural University, Beijing, ChinaUniversity of Wisconsin-Madison cftian@cau.edu.cn.
China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nitrogen phosphotransferase system (PTS(Ntr)) consists of EI(Ntr), NPr, and EIIA(Ntr). The active phosphate moiety derived from phosphoenolpyruvate is transferred through EI(Ntr) and NPr to EIIA(Ntr). Sinorhizobium fredii can establish a nitrogen-fixing symbiosis with the legume crops soybean (as determinate nodules) and pigeonpea (as indeterminate nodules). In this study, S. fredii strains with mutations in ptsP and ptsO (encoding EI(Ntr) and NPr, respectively) formed ineffective nodules on soybeans, while a strain with a ptsN mutation (encoding EIIA(Ntr)) was not defective in symbiosis with soybeans. Notable reductions in the numbers of bacteroids within each symbiosome and of poly-β-hydroxybutyrate granules in bacteroids were observed in nodules infected by the ptsP or ptsO mutant strains but not in those infected with the ptsN mutant strain. However, these defects of the ptsP and ptsO mutant strains were recovered in ptsP ptsN and ptsO ptsN double-mutant strains, implying a negative role of unphosphorylated EIIA(Ntr) in symbiosis. Moreover, the symbiotic defect of the ptsP mutant was also recovered by expressing EI(Ntr) with or without the GAF domain, indicating that the putative glutamine-sensing domain GAF is dispensable in symbiotic interactions. The critical role of PTS(Ntr) in symbiosis was also observed when related PTS(Ntr) mutant strains of S. fredii were inoculated on pigeonpea plants. Furthermore, nodule occupancy and carbon utilization tests suggested that multiple outputs could be derived from components of PTS(Ntr) in addition to the negative role of unphosphorylated EIIA(Ntr).

Indexed as

Nitrogen FixationSymbiosisCajanusGene DeletionGlycine maxNitrogenPhosphatesPhosphoenolpyruvatePhosphotransferasesRoot Nodules, PlantSinorhizobium frediiNitrogenPhosphatesPhosphoenolpyruvatePhosphotransferases

Identifiers

PMID26682851
PMCPMC4751829
OpenAlexW2353141171

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.