Evidence map›Paper›PMID 26682552›Full record

ArticlePLoS biology2015

Phosphorylation of the Synaptonemal Complex Protein Zip1 Regulates the Crossover/Noncrossover Decision during Yeast Meiosis.

Xiangyu Chen, Ray T Suhandynata, Rima Sandhu, Beth Rockmill, Neeman Mohibullah, Hengyao Niu, Jason Liang, Hsiao-Chi Lo, Danny E Miller, Huilin Zhou and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 61 citations in OpenAlex.

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  3. bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 1 country.

Xiangyu ChenBiochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, United States of America.
Ray T SuhandynataBiochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, United States of America.
Rima SandhuCenter for Gene Regulation in Health and Disease and Department of Biological Sciences, Cleveland State University, Cleveland, Ohio, United States of America.
Beth RockmillBiochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, United States of America.
Neeman MohibullahMolecular Biology Program, Howard Hughes Medical Institute, Memorial Sloan-Kettering Cancer Center, New York City, New York, United States of America.
Hengyao NiuMolecular and Cellular Biochemistry, Indiana University, Bloomington, Indiana, United States of America.
Jason LiangLudwig Institute for Cancer Research, University of California, San Diego, La Jolla, California, United States of America.
Hsiao-Chi LoBiochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, United States of America.
Danny E MillerStowers Institute for Medical Research, Kansas City, Missouri, United States of America.
Huilin ZhouLudwig Institute for Cancer Research, University of California, San Diego, La Jolla, California, United States of America.
G Valentin BörnerCenter for Gene Regulation in Health and Disease and Department of Biological Sciences, Cleveland State University, Cleveland, Ohio, United States of America.
Nancy M HollingsworthBiochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, United States of America.
Stony Brook University · USCleveland State University · USHoward Hughes Medical Institute · USIndiana University Bloomington · USLudwig Cancer Research · USUniversity of California, San Diego · USUniversity of Kansas Medical Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Contemporary Approaches to Cancer Cell Signaling and CommunicationT32CA009523 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DONOGHUE, DANIEL J, YANG, JING · 1985 to 2025
$12.1M
ANALYSIS OF MEIOTIC CHROMOSOME SYNAPSIS IN YEASTR01GM050717 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI HOLLINGSWORTH, NANCY M. · 1995 to 2020
$8.0M
Wiring of Gene Expression in the Early Meiotic ProgramP01GM088297 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI FUTCHER, BRUCE BRUCE · 2010 to 2014
$7.4M
Mechanism of meiotic recombination in yeastR01GM058673 · NIGMS · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI KEENEY, SCOTT · 1999 to 2015
$6.0M
MOLECULAR AND CELLULAR BIOLOGY TRAINING PROGRAMT32GM008468 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI NEIMAN, AARON M · 1997 to 2016
$1.9M
Mechanisms and Crosstalk of DNA Break Resection PathwaysR00ES021441 · NIEHS · TRUSTEES OF INDIANA UNIVERSITY · PI NIU, HENGYAO · 2015 to 2017
$747k
Control of pairing and recombination during meiosisR15GM099056 · NIGMS · CLEVELAND STATE UNIVERSITY · PI BOERNER, VALENTIN · 2011 to 2011
$284k
Howard Hughes Medical InstituteNCI NIH HHS P30 CA008748NCI NIH HHS T32 CA009523NIEHS NIH HHS R00 ES021441NIGMS NIH HHS P01 GM088297NIGMS NIH HHS P0 GM088297NIGMS NIH HHS R01 GM050717NIGMS NIH HHS R01 GM058673NIGMS NIH HHS R15 GM099056NIGMS NIH HHS R15 GM099056-01NIGMS NIH HHS T32 GM008468
6 · The paper itself

Abstract

Interhomolog crossovers promote proper chromosome segregation during meiosis and are formed by the regulated repair of programmed double-strand breaks. This regulation requires components of the synaptonemal complex (SC), a proteinaceous structure formed between homologous chromosomes. In yeast, SC formation requires the "ZMM" genes, which encode a functionally diverse set of proteins, including the transverse filament protein, Zip1. In wild-type meiosis, Zmm proteins promote the biased resolution of recombination intermediates into crossovers that are distributed throughout the genome by interference. In contrast, noncrossovers are formed primarily through synthesis-dependent strand annealing mediated by the Sgs1 helicase. This work identifies a conserved region on the C terminus of Zip1 (called Zip1 4S), whose phosphorylation is required for the ZMM pathway of crossover formation. Zip1 4S phosphorylation is promoted both by double-strand breaks (DSBs) and the meiosis-specific kinase, MEK1/MRE4, demonstrating a role for MEK1 in the regulation of interhomolog crossover formation, as well as interhomolog bias. Failure to phosphorylate Zip1 4S results in meiotic prophase arrest, specifically in the absence of SGS1. This gain of function meiotic arrest phenotype is suppressed by spo11Δ, suggesting that it is due to unrepaired breaks triggering the meiotic recombination checkpoint. Epistasis experiments combining deletions of individual ZMM genes with sgs1-md zip1-4A indicate that Zip1 4S phosphorylation functions prior to the other ZMMs. These results suggest that phosphorylation of Zip1 at DSBs commits those breaks to repair via the ZMM pathway and provides a mechanism by which the crossover/noncrossover decision can be dynamically regulated during yeast meiosis.

Indexed as

MeiosisProtein Processing, Post-TranslationalAmino Acid SequenceAmino Acid SubstitutionConserved SequenceCrossing Over, GeneticDNA RepairEndodeoxyribonucleasesGene DeletionMeiotic Recombination Protein SPO11Molecular Sequence DataMutagenesis, Site-DirectedMutant ProteinsNuclear ProteinsPeptide FragmentsPhosphorylationEndodeoxyribonucleasesMeiotic Recombination Protein SPO11Mutant ProteinsNuclear ProteinsPeptide FragmentsRecombinant Fusion ProteinsRecQ HelicasesSaccharomyces cerevisiae ProteinsSGS1 protein, S cerevisiaeSpo11 protein, S cerevisiaeZip1 protein, S cerevisiae

Identifiers

PMID26682552
PMCPMC4684282
OpenAlexW2213402634

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.