Evidence map›Paper›PMID 26682068›Full record

ReviewInternational journal of medicinal chemistry2015

A Review of the Updated Pharmacophore for the Alpha 5 GABA(A) Benzodiazepine Receptor Model.

Terry Clayton, Michael M Poe, Sundari Rallapalli, Poonam Biawat, Miroslav M Savić, James K Rowlett, George Gallos, Charles W Emala, Catherine C Kaczorowski, Douglas C Stafford and 2 more

Abstract readReview
In one paragraph

Review in International journal of medicinal chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Development of Inhaled GABAACS pharmacology & translational science · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Melanoma Cell Intrinsic GABAInternational journal of radiation oncology, biology, physics · 2021
    Article
  11. Herbal Medicinal Products fromTheScientificWorldJournal · 2020
    Review
  12. Article
  13. Modulating native GABAJournal of neuro-oncology · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Terry ClaytonDepartment of Chemistry and Biochemistry, University of Wisconsin-Milwaukee, Milwaukee, WI 53201, USA.
Michael M PoeDepartment of Chemistry and Biochemistry, University of Wisconsin-Milwaukee, Milwaukee, WI 53201, USA.
Sundari RallapalliDepartment of Chemistry and Biochemistry, University of Wisconsin-Milwaukee, Milwaukee, WI 53201, USA.
Poonam BiawatDepartment of Chemistry and Biochemistry, University of Wisconsin-Milwaukee, Milwaukee, WI 53201, USA.
Miroslav M SavićDepartment of Pharmacology, Faculty of Pharmacy, University of Belgrade, Belgrade, Serbia.
James K RowlettDepartment of Psychiatry and Human Behavior, University of Mississippi Medical Center, Jackson, MS 39216, USA.
George GallosDepartment of Anesthesiology, Columbia University, New York, NY 10032, USA.
Charles W EmalaDepartment of Anesthesiology, Columbia University, New York, NY 10032, USA.
Catherine C KaczorowskiDepartment of Anatomy and Neurobiology, University of Tennessee Health Science Center, Memphis, TN 38163, USA.
Douglas C StaffordMilwaukee Institute of Drug Discovery, University of Wisconsin-Milwaukee, Milwaukee, WI 53201, USA.
Leggy A ArnoldDepartment of Chemistry and Biochemistry, University of Wisconsin-Milwaukee, Milwaukee, WI 53201, USA ; Milwaukee Institute of Drug Discovery, University of Wisconsin-Milwaukee, Milwaukee, WI 53201, USA.
James M CookDepartment of Chemistry and Biochemistry, University of Wisconsin-Milwaukee, Milwaukee, WI 53201, USA ; Milwaukee Institute of Drug Discovery, University of Wisconsin-Milwaukee, Milwaukee, WI 53201, USA.

Funding

Neuromuscular blocker-induced asthma during anesthesiaR01GM065281 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI EMALA, CHARLES W · 2003 to 2018
$5.4M
Development of new drugs for asthma by targeting GABA(A) receptors in the lungR01HL118561 · NHLBI · UNIVERSITY OF WISCONSIN MILWAUKEE · PI COOK, JAMES M · 2014 to 2017
$2.0M
Design of New Therapeutic Agents to Treat SchizophreniaR01MH096463 · NIMH · UNIVERSITY OF WISCONSIN MILWAUKEE · PI COOK, JAMES M · 2013 to 2017
$1.9M
Synthesis of Alpha2/Alpha3 GABA Agonists to Treat Neuropathic PainR01NS076517 · NINDS · UNIVERSITY OF WISCONSIN MILWAUKEE · PI COOK, JAMES M · 2012 to 2015
$1.3M
Proteomics of memory failure: unraveling the relationship between 'normal' brainR00AG039511 · NIA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI KACZOROWSKI, CATHERINE COOK · 2013 to 2015
$730k
THERAPEUTIC TARGETING OF THE GABAA CHANNEL ON AIRWAY SMOOTH MUSCLEK08GM093137 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GALLOS, GEORGE · 2010 to 2014
$628k
Mapping AD Memory Failure: Molecules to Connectivity of Brain NetworkR21AG048446 · NIA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI KACZOROWSKI, CATHERINE COOK · 2015 to 2016
$418k
Proteomics of memory: Normal brain aging and Alzheimers DiseaseK99AG039511 · NIA · MEDICAL COLLEGE OF WISCONSIN · PI KACZOROWSKI, CATHERINE COOK · 2012 to 2013
$105k
NHLBI NIH HHS R01 HL118561NIA NIH HHS K99 AG039511NIA NIH HHS R00 AG039511NIA NIH HHS R21 AG048446NIGMS NIH HHS K08 GM093137NIGMS NIH HHS R01 GM065281NIMH NIH HHS R01 MH096463NINDS NIH HHS R01 NS076517
6 · The paper itself

Abstract

An updated model of the GABA(A) benzodiazepine receptor pharmacophore of the α5-BzR/GABA(A) subtype has been constructed prompted by the synthesis of subtype selective ligands in light of the recent developments in both ligand synthesis, behavioral studies, and molecular modeling studies of the binding site itself. A number of BzR/GABA(A) α5 subtype selective compounds were synthesized, notably α5-subtype selective inverse agonist PWZ-029 (1) which is active in enhancing cognition in both rodents and primates. In addition, a chiral positive allosteric modulator (PAM), SH-053-2'F-R-CH3 (2), has been shown to reverse the deleterious effects in the MAM-model of schizophrenia as well as alleviate constriction in airway smooth muscle. Presented here is an updated model of the pharmacophore for α5β2γ2 Bz/GABA(A) receptors, including a rendering of PWZ-029 docked within the α5-binding pocket showing specific interactions of the molecule with the receptor. Differences in the included volume as compared to α1β2γ2, α2β2γ2, and α3β2γ2 will be illustrated for clarity. These new models enhance the ability to understand structural characteristics of ligands which act as agonists, antagonists, or inverse agonists at the Bz BS of GABA(A) receptors.

Identifiers

PMID26682068
PMCPMC4657098

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.