Evidence map›Paper›PMID 26680226›Full record

ArticleScientific reports2015

Identification of a novel antimicrobial peptide from amphioxus Branchiostoma japonicum by in silico and functional analyses.

Haohan Liu, Miaomiao Lei, Xiaoyuan Du, Pengfei Cui, Shicui Zhang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 47 citations in OpenAlex.

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  12. Hepatic cecum: a key integrator of immunity in amphioxus.Marine life science & technology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Haohan LiuLaboratory for Evolution &Development, Institute of Evolution &Marine Biodiversity and Department of Marine Biology, Ocean University of China, Qingdao 266003, China.
Miaomiao LeiLaboratory for Evolution &Development, Institute of Evolution &Marine Biodiversity and Department of Marine Biology, Ocean University of China, Qingdao 266003, China.
Xiaoyuan DuLaboratory for Evolution &Development, Institute of Evolution &Marine Biodiversity and Department of Marine Biology, Ocean University of China, Qingdao 266003, China.
Pengfei CuiLaboratory for Evolution &Development, Institute of Evolution &Marine Biodiversity and Department of Marine Biology, Ocean University of China, Qingdao 266003, China.
Shicui ZhangLaboratory for Evolution &Development, Institute of Evolution &Marine Biodiversity and Department of Marine Biology, Ocean University of China, Qingdao 266003, China.
Ocean University of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence of multi-drug resistant (MDR) microbes leads to urgent demands for novel antibiotics exploration. We demonstrated a cDNA from amphioxus Branchiostoma japonicum, designated Bjamp1, encoded a protein with features typical of antimicrobial peptides (AMPs), which is not homologous to any AMPs currently discovered. It was found that Bjamp1 was expressed in distinct tissues, and its expression was remarkably up-regulated following challenge with LPS and LTA. Moreover, the synthesized putative mature AMP, mBjAMP1, underwent a coil-to-helix transition in the presence of TFE or SDS, agreeing well with the expectation that BjAMP1 was a potential AMP. Functional assays showed that mBjAMP1 inhibited the growth of all the bacteria tested, and induced membrane/cytoplasmic damage. ELISA indicated that mBjAMP1 was a pattern recognition molecule capable of identifying LPS and LTA. Importantly, mBjAMP1 disrupted the bacterial membranes by a membranolytic mechanism. Additionally, mBjAMP1 was non-cytotoxic to mammalian cells. Collectively, these data indicate that mBjAMP1 is a new AMP with a high bacterial membrane selectivity, rendering it a promising template for the design of novel peptide antibiotics against MDR microbes. It also shows for the first time that use of signal conserved sequence of AMPs is effective identifying potential AMPs across different animal classes.

Indexed as

Amino Acid SequenceAnimalsAnti-Infective AgentsAntimicrobial Cationic PeptidesBacteriaCell LineCell SurvivalCircular DichroismDatabases, GeneticErythrocytesHemolysisHumansLanceletsLipopolysaccharidesMiceMicrobial Sensitivity TestsAnti-Infective AgentsAntimicrobial Cationic PeptidesLipopolysaccharideslipoteichoic acidTeichoic Acids

Identifiers

PMID26680226
PMCPMC4683396
OpenAlexW2409802721

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.