Evidence map›Paper›PMID 26680015›Full record

ReviewJournal of proteome research2016

Systems Proteomics View of the Endogenous Human Claudin Protein Family.

Fei Liu, Michael Koval, Shoba Ranganathan, Susan Fanayan, William S Hancock, Emma K Lundberg, Ronald C Beavis, Lydie Lane, Paula Duek, Leon McQuade and 2 more

Abstract readReview
In one paragraph

Review in Journal of proteome research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Editorial: Editors' showcase 2023: insights in cell adhesion and migration.Frontiers in cell and developmental biology · 2024
    Article
  9. Article
  10. Human Claudin-7Frontiers in molecular biosciences · 2022
    Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Tight Junctions as Targets and Effectors of Mucosal Immune Homeostasis.Cellular and molecular gastroenterology and hepatology · 2020
    Review
  18. Article
  19. Cell Biology of Tight Junction Barrier Regulation and Mucosal Disease.Cold Spring Harbor perspectives in biology · 2018
    Review
  20. Novel Aspects of Renal Magnesium Homeostasis.Frontiers in pediatrics · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 8 institutions in 6 countries.

Fei Liu
Michael KovalDepartment of Medicine, Division of Pulmonary, Allergy, Critical Care and Sleep Medicine, and Department of Cell Biology, Emory University School of Medicine , 205 Whitehead Biomedical Research Building, 615 Michael Street, Atlanta, Georgia 30322, United States.
Shoba Ranganathan
Susan Fanayan
William S HancockBarnett Institute and Department of Chemistry and Chemical Biology, Northeastern University , Boston, Massachusetts 02115, United States.
Emma K LundbergSciLifeLab, School of Biotechnology, Royal Institute of Technology (KTH) , SE-171 21 Solna, Stockholm, Sweden.
Ronald C BeavisDepartment of Biochemistry and Medical Genetics, University of Manitoba , 744 Bannatyne Avenue, Winnipeg, Manitoba R3E 0W3, Canada.
Lydie LaneSIB-Swiss Institute of Bioinformatics , CMU - Rue Michel-Servet 1, 1211 Geneva, Switzerland.
Paula DuekSIB-Swiss Institute of Bioinformatics , CMU - Rue Michel-Servet 1, 1211 Geneva, Switzerland.
Leon McQuade
Neil L KelleherDepartment of Chemistry, Department of Molecular Biosciences, and Proteomics Center of Excellence, Northwestern University , 2145 North Sheridan Road, Evanston, Illinois 60208, United States.
Mark S Baker
Macquarie University · AUSIB Swiss Institute of Bioinformatics · CHAustralian Genome Research Facility · AUEmory University · USNortheastern University · USNorthwestern University · USScience for Life Laboratory · SEUniversity of Manitoba · CA

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1993 to 2026
$153.9M
Molecular regulation of pulmonary tight junctionsR01HL116958 · NHLBI · EMORY UNIVERSITY · PI KOVAL, MICHAEL H. · 2013 to 2016
$1.5M
NCI NIH HHS P30 CA060553NHLBI NIH HHS R01 HL116958
6 · The paper itself

Abstract

Claudins are the major transmembrane protein components of tight junctions in human endothelia and epithelia. Tissue-specific expression of claudin members suggests that this protein family is not only essential for sustaining the role of tight junctions in cell permeability control but also vital in organizing cell contact signaling by protein-protein interactions. How this protein family is collectively processed and regulated is key to understanding the role of junctional proteins in preserving cell identity and tissue integrity. The focus of this review is to first provide a brief overview of the functional context, on the basis of the extensive body of claudin biology research that has been thoroughly reviewed, for endogenous human claudin members and then ascertain existing and future proteomics techniques that may be applicable to systematically characterizing the chemical forms and interacting protein partners of this protein family in human. The ability to elucidate claudin-based signaling networks may provide new insight into cell development and differentiation programs that are crucial to tissue stability and manipulation.

Indexed as

Signal TransductionClaudinsEndotheliumEpitheliumGlycosylationHumansMultigene FamilyProtein Interaction MapsProteomicsTight JunctionsClaudinscell-contact signalingchemical proteomicsMembrane protein complexesmembrane proteomicssystems proteomicstargeted proteomicstop-down proteomics

Identifiers

PMID26680015
PMCPMC4777318
OpenAlexW2216726165

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.