Evidence map›Paper›PMID 26678035›Full record

ArticleOncotarget2016

Prognostic significance of FAM83D gene expression across human cancer types.

Peter J Walian, Bo Hang, Jian-Hua Mao

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 56 citations in OpenAlex.

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  10. Refractory alveolar rhabdomyosarcoma in an 11-year-old male.Cold Spring Harbor molecular case studies · 2021
    Article
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  15. Review
  16. Oncotarget · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Peter J WalianLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94127, USA.
Bo HangLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94127, USA.
Jian-Hua MaoLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94127, USA.
Lawrence Berkeley National Laboratory · US

Funding

The Role of Fbxw7 in genetic instability and cancerR01CA116481 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MAO, JIAN-HUA · 2008 to 2012
$1.7M
NCI NIH HHS R01 CA116481
6 · The paper itself

Abstract

The family with sequence similarity 83, member D (FAM83D) gene has been proposed as a new prognostic marker for breast cancer. Here we further evaluate the prognostic significance of FAM83D expression in different breast cancer subtypes using a meta-analysis. Patients with higher FAM83D mRNA levels have significantly decreased overall and metastatic relapse-free survival, particularly in the group of patients with ER-positive, or luminal subtype tumors. We also assessed FAM83D alterations and its prognostic significance across 22 human cancer types using The Cancer Genome Atlas (TCGA). FAM83D is frequently gained in the majority of human cancer types, resulting in the elevated expression of FAM83D. Higher levels of FAM83D mRNA expression are significantly associated with decreased overall survival in several cancer types. Finally, we demonstrate that TP53 mutation in human cancers is coupled to a significant increase in the expression of FAM83D, and that a higher level of FAM83D expression is positively correlated with an increase in genome instability in many cancer types. These results identify FAM83D as a potential novel oncogene across multiple human cancer types.

Indexed as

Gene Expression Regulation, NeoplasticCell Cycle ProteinsHumansMeta-Analysis as TopicMicrotubule-Associated ProteinsMutationNeoplasmsPrognosisReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, MessengerTumor Suppressor Protein p53Cell Cycle ProteinsFAM83D protein, humanMicrotubule-Associated ProteinsRNA, MessengerTP53 protein, humanTumor Suppressor Protein p53FAM83Dgenetic instabilityhuman cancerprognosis

Identifiers

PMID26678035
PMCPMC4823109
OpenAlexW2260637048

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.