Evidence map›Paper›PMID 26677855›Full record

ArticlePLoS genetics2015

Genome-Wide Scan Informed by Age-Related Disease Identifies Loci for Exceptional Human Longevity.

Kristen Fortney, Edgar Dobriban, Paolo Garagnani, Chiara Pirazzini, Daniela Monti, Daniela Mari, Gil Atzmon, Nir Barzilai, Claudio Franceschi, Art B Owen and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed, 3 pooled it
14.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 3 syntheses or guidelines pooled it, 177 citations in OpenAlex.

  1. Pooled it
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  13. Clinical and neuropathological analysis of Down syndrome over 7 decades of life.Journal of neuropathology and experimental neurology · 2025
    Article
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  16. Review
  17. Article
  18. Article
  19. Review
  20. Aging Hallmarks and the Role of Oxidative Stress.Antioxidants (Basel, Switzerland) · 2023
    Review

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 2 countries.

Kristen FortneyDepartment of Developmental Biology, Stanford University, Stanford, California, United States of America.
Edgar DobribanDepartment of Statistics, Stanford University, Stanford, California, United States of America.
Paolo GaragnaniDepartment of Experimental, Diagnostic and Specialty Medicine Experimental Pathology, University of Bologna, Bologna, Italy.
Chiara PirazziniDepartment of Experimental, Diagnostic and Specialty Medicine Experimental Pathology, University of Bologna, Bologna, Italy.
Daniela MontiDepartment of Clinical, Experimental and Biomedical Sciences, University of Florence, Florence, Italy.
Daniela MariDepartment of Medical Sciences, University of Milan, Milan, Italy.
Gil AtzmonDepartment of Genetics, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Nir BarzilaiDepartment of Genetics, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Claudio FranceschiDepartment of Experimental, Diagnostic and Specialty Medicine Experimental Pathology, University of Bologna, Bologna, Italy.
Art B OwenDepartment of Statistics, Stanford University, Stanford, California, United States of America.
Stuart K KimDepartment of Developmental Biology, Stanford University, Stanford, California, United States of America.
Stanford University · USAlbert Einstein College of Medicine · USInstitute of Neurological Sciences · ITPoliclinico S.Orsola-Malpighi · ITUniversity of Bologna · ITUniversity of Florence · ITUniversity of Milan · IT

Funding

Core-010UL1TR001073 · NCATS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI KELLER, MARLA J, SHAMOON, HARRY · 2013 to 2017
$21.3M
Einstein's Nathan Shock Center of Excellence in Basic Biology of AgingP30AG038072 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI BARZILAI, NIR J · 2010 to 2024
$10.8M
ROLE OF NUTRIENTS IN AGE-RELATED INSULIN RESISTANCEP01AG021654 · NIA · YESHIVA UNIVERSITY · PI OBICI, SILVANA · 2003 to 2007
$10.6M
Mechanisms of Aging in C. elegansR01AG025941 · NIA · STANFORD UNIVERSITY · PI DAVIS, RONALD WAYNE · 2007 to 2017
$3.1M
LGP/LongenityR01AG046949 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI BARZILAI, NIR J · 2013 to 2017
$2.4M
Epigenetic Profiling in Healthy Aging and Exceptional LongevityR01AG042188 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI ATZMON, GIL, BARZILAI, NIR J · 2011 to 2015
$2.0M
NCATS NIH HHS UL1 TR001073NIA NIH HHS AG042188-01NIA NIH HHS AG046949-01NIA NIH HHS P01 AG021654NIA NIH HHS P01AG021654NIA NIH HHS P30 AG038072NIA NIH HHS P30AG038072NIA NIH HHS R01 AG025941NIA NIH HHS R01 AG042188NIA NIH HHS R01 AG046949
6 · The paper itself

Abstract

We developed a new statistical framework to find genetic variants associated with extreme longevity. The method, informed GWAS (iGWAS), takes advantage of knowledge from large studies of age-related disease in order to narrow the search for SNPs associated with longevity. To gain support for our approach, we first show there is an overlap between loci involved in disease and loci associated with extreme longevity. These results indicate that several disease variants may be depleted in centenarians versus the general population. Next, we used iGWAS to harness information from 14 meta-analyses of disease and trait GWAS to identify longevity loci in two studies of long-lived humans. In a standard GWAS analysis, only one locus in these studies is significant (APOE/TOMM40) when controlling the false discovery rate (FDR) at 10%. With iGWAS, we identify eight genetic loci to associate significantly with exceptional human longevity at FDR < 10%. We followed up the eight lead SNPs in independent cohorts, and found replication evidence of four loci and suggestive evidence for one more with exceptional longevity. The loci that replicated (FDR < 5%) included APOE/TOMM40 (associated with Alzheimer's disease), CDKN2B/ANRIL (implicated in the regulation of cellular senescence), ABO (tags the O blood group), and SH2B3/ATXN2 (a signaling gene that extends lifespan in Drosophila and a gene involved in neurological disease). Our results implicate new loci in longevity and reveal a genetic overlap between longevity and age-related diseases and traits, including coronary artery disease and Alzheimer's disease. iGWAS provides a new analytical strategy for uncovering SNPs that influence extreme longevity, and can be applied more broadly to boost power in other studies of complex phenotypes.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyAgingHumansLongevityPolymorphism, Single Nucleotide

Identifiers

PMID26677855
PMCPMC4683064
OpenAlexW2201499402

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.