Evidence map›Paper›PMID 26677228›Full record

ReviewThe Journal of biological chemistry2016

Human Enteroids/Colonoids and Intestinal Organoids Functionally Recapitulate Normal Intestinal Physiology and Pathophysiology.

Nicholas C Zachos, Olga Kovbasnjuk, Jennifer Foulke-Abel, Julie In, Sarah E Blutt, Hugo R de Jonge, Mary K Estes, Mark Donowitz

Open access · hybridAbstract readReview
In one paragraph

Review in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 204 papers.

0numbers the graph read from it
0cells of the map it votes in
204citing papers in PubMed
18.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

204 citing papers in PubMed, 292 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Selective modulation of murine intestinal MAmerican journal of physiology. Cell physiology · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

144 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Nicholas C ZachosFrom the Division of Gastroenterology and Hepatology, Department of Medicine, and.
Olga KovbasnjukFrom the Division of Gastroenterology and Hepatology, Department of Medicine, and.
Jennifer Foulke-AbelFrom the Division of Gastroenterology and Hepatology, Department of Medicine, and.
Julie InFrom the Division of Gastroenterology and Hepatology, Department of Medicine, and.
Sarah E Bluttthe Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas 77030, and.
Hugo R de Jongethe Department of Gastroenterology and Hepatology, Erasmus MC-University Medical Center Rotterdam, Rotterdam 3000CA, The Netherlands.
Mary K Estesthe Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas 77030, and.
Mark DonowitzFrom the Division of Gastroenterology and Hepatology, Department of Medicine, and Department of Physiology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205, mdonowit@jhmi.edu.
Baylor College of Medicine · USErasmus MC · NLJohns Hopkins University · US

Funding

X-ray Crystallographic Studies on CalicivirusesP01AI057788 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI PRASAD, BIDADI VENKATARAM · 2004 to 2024
$34.4M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI James Versalovic · 2001 to 2026
$28.3M
Novel Platforms for Human Intestinal Enteroids: Matrix, Mechanics, and TopographyU19AI116497 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI ESTES, MARY KOLB, MARESSO, ANTHONY W · 2015 to 2025
$13.2M
Two-Photon Microscopy Imaging CoreP01DK072084 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI DONOWITZ, MARK · 2006 to 2013
$12.7M
Translational Research Enhancement CoreP30DK089502 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI ZACHOS, NICHOLAS CONSTANTINE · 2011 to 2020
$12.0M
Translational Approaches to Develop Drug Therapy for DiarrheaR24DK099803 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI DONOWITZ, MARK · 2014 to 2019
$8.9M
Regulation of Rotavirus ReplicationR01AI080656 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI Sue Ellen Crawford, Mary Kolb Estes · 2009 to 2026
$7.9M
DIARRHEAL DISEASES: A PHYSIOLOGIC APPROACH TO TREATMENTR01DK026523 · NIDDK · TUFTS MEDICAL CENTER · PI DONOWITZ, MARK · 1986 to 2016
$7.8M
Intestinal Stem Cell Consortium Coordinating CenterU01DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2009 to 2018
$6.5M
BASIC SCIENCE RESEARCH IN DIGESTIVE DISEASEST32DK007632 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI DONOWITZ, MARK · 1989 to 2018
$5.4M
PDZ Domain Proteins and NHE3 RegulationR01DK061765 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI DONOWITZ, MARK, TSE, CHUNG-MING · 2004 to 2013
$4.7M
Limited Competition for the Continuation of the Intestinal Stem Cell Consortium Coordinating CenterU24DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2019 to 2023
$2.3M
NCATS NIH HHS U18 TR000552NCATS NIH HHS U18-TR000552NIAID NIH HHS P01 AI057788NIAID NIH HHS R01 AI080656NIAID NIH HHS R01-AI080656NIAID NIH HHS U19 AI116497NIDDK NIH HHS P01 DK072084NIDDK NIH HHS P01-DK072084NIDDK NIH HHS P30 DK056338NIDDK NIH HHS P30-DK056338NIDDK NIH HHS P30 DK089502NIDDK NIH HHS P30-DK089502NIDDK NIH HHS R01 DK026523NIDDK NIH HHS R01-DK026523NIDDK NIH HHS R01 DK061765NIDDK NIH HHS R01-DK061765NIDDK NIH HHS R24 DK099803NIDDK NIH HHS T32 DK007632NIDDK NIH HHS T32-DK007632NIDDK NIH HHS U01 DK085532NIDDK NIH HHS U24 DK085532
6 · The paper itself

Abstract

Identification of Lgr5 as the intestinal stem cell marker as well as the growth factors necessary to replicate adult intestinal stem cell division has led to the establishment of the methods to generate "indefinite" ex vivo primary intestinal epithelial cultures, termed "mini-intestines." Primary cultures developed from isolated intestinal crypts or stem cells (termed enteroids/colonoids) and from inducible pluripotent stem cells (termed intestinal organoids) are being applied to study human intestinal physiology and pathophysiology with great expectations for translational applications, including regenerative medicine. Here we discuss the physiologic properties of these cultures, their current use in understanding diarrhea-causing host-pathogen interactions, and potential future applications.

Indexed as

DiarrheaIntestinal MucosaIntestinesOrganoidsAdult Stem CellsAntigens, DifferentiationHumansInduced Pluripotent Stem CellsReceptors, G-Protein-CoupledAntigens, DifferentiationLGR5 protein, humanReceptors, G-Protein-Coupleddifferentiationenteroidinduced pluripotent stem cell (iPS cell) (iPSC)intestinal epitheliumlgr5organoidstem cellstransport

Identifiers

PMID26677228
PMCPMC4759158
OpenAlexW2201442248

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.