Evidence map›Paper›PMID 26676779›Full record

ArticleJournal of virology2015

Membrane Binding of the Rous Sarcoma Virus Gag Protein Is Cooperative and Dependent on the Spacer Peptide Assembly Domain.

Robert A Dick, Marilia Barros, Danni Jin, Mathias Lösche, Volker M Vogt

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Robert A DickDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA rad82@cornell.edu.
Marilia BarrosDepartment of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA.
Danni JinDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA.
Mathias LöscheDepartment of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA Center for Neutron Research, National Institute of Standards and Technology, Gaithersburg, Maryland, USA.
Volker M VogtDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA.
Cornell University · USCarnegie Mellon University · USNational Institute of Standards and Technology · US

Funding

Structure and Assembly of RetrovirusesR01GM107013 · NIGMS · CORNELL UNIVERSITY · PI VOGT, VOLKER M. · 2013 to 2018
$1.5M
Membrane Coupling and Dynamic Reorganization of Gag in Viral BuddingR01GM101647 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI LOESCHE, MATHIAS · 2012 to 2015
$1.2M
UltraVIEW VoX spinning disk confocal for core facilityS10OD010605 · OD · CORNELL UNIVERSITY · PI WILLIAMS, REBECCA M · 2012 to 2012
$595k
NIGMS NIH HHS R01 GM101647NIGMS NIH HHS R01GM101647NIGMS NIH HHS R01 GM107013NIGMS NIH HHS R01GM107013NIH HHS 1S10OD010605NIH HHS S10 OD010605
6 · The paper itself

Abstract

unlabelledThe principles underlying membrane binding and assembly of retroviral Gag proteins into a lattice are understood. However, little is known about how these processes are related. Using purified Rous sarcoma virus Gag and Gag truncations, we studied the interrelation of Gag-Gag interaction and Gag-membrane interaction. Both by liposome binding and by surface plasmon resonance on a supported bilayer, Gag bound to membranes much more tightly than did matrix (MA), the isolated membrane binding domain. In principle, this difference could be explained either by protein-protein interactions leading to cooperativity in membrane binding or by the simultaneous interaction of the N-terminal MA and the C-terminal nucleocapsid (NC) of Gag with the bilayer, since both are highly basic. However, we found that NC was not required for strong membrane binding. Instead, the spacer peptide assembly domain (SPA), a putative 24-residue helical sequence comprising the 12-residue SP segment of Gag and overlapping the capsid (CA) C terminus and the NC N terminus, was required. SPA is known to be critical for proper assembly of the immature Gag lattice. A single amino acid mutation in SPA that abrogates assembly in vitro dramatically reduced binding of Gag to liposomes. In vivo, plasma membrane localization was dependent on SPA. Disulfide cross-linking based on ectopic Cys residues showed that the contacts between Gag proteins on the membrane are similar to the known contacts in virus-like particles. Taken together, we interpret these results to mean that Gag membrane interaction is cooperative in that it depends on the ability of Gag to multimerize. IMPORTANCE: The retroviral structural protein Gag has three major domains. The N-terminal MA domain interacts directly with the plasma membrane (PM) of cells. The central CA domain, together with immediately adjoining sequences, facilitates the assembly of thousands of Gag molecules into a lattice. The C-terminal NC domain interacts with the genome, resulting in packaging of viral RNA. For assembly in vitro with purified Gag, in the absence of membranes, binding of NC to nucleic acid somehow facilitates further Gag-Gag interactions that lead to formation of the Gag lattice. The contributions of MA-mediated membrane binding to virus particle assembly are not well understood. Here, we report that in the absence of nucleic acid, membranes provide a platform that facilitates Gag-Gag interactions. This study demonstrates that the binding of Gag, but not of MA, to membranes is cooperative and identifies SPA as a major factor that controls this cooperativity.

Indexed as

Protein MultimerizationDNA Mutational AnalysisGene Products, gagLipid BilayersProtein BindingProtein Structure, TertiaryRous sarcoma virusGene Products, gagLipid Bilayers

Identifiers

PMID26676779
PMCPMC4810714
OpenAlexW2492422068

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.