Evidence map›Paper›PMID 26676750›Full record

ArticleCancer research2016

Herbacetin Is a Novel Allosteric Inhibitor of Ornithine Decarboxylase with Antitumor Activity.

Dong Joon Kim, Eunmiri Roh, Mee-Hyun Lee, Naomi Oi, Do Young Lim, Myoung Ok Kim, Young-Yeon Cho, Angelo Pugliese, Jung-Hyun Shim, Hanyong Chen and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 53 citations in OpenAlex.

  1. Herbacetin as a novel therapeutic agent for pulmonary and renal fibrosis by targeting TGFBR2 for degradation.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. A newAmino acids · 2023
    Article
  6. Article
  7. Structural Basis for Allostery in PLP-dependent Enzymes.Frontiers in molecular biosciences · 2022
    Review
  8. Discovery of Herbacetin as a Novel SGK1 Inhibitor to Alleviate Myocardial Hypertrophy.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 5 institutions in 3 countries.

Dong Joon Kim *The Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Eunmiri Roh *The Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Mee-Hyun LeeThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Naomi OiThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Do Young LimThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Myoung Ok KimThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Young-Yeon ChoDepartment of Pharmacology, College of Pharmacy, The Catholic University of Korea, Bucheon 420-743, Republic of Korea.
Angelo PuglieseThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Jung-Hyun ShimThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Hanyong ChenThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Eun Jin ChoThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Jong-Eun KimThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Sun Chul KangDepartment of Biotechnology, Daegu University, Kyoungsan, Kyoungbook 712-714, Republic of Korea.
Souren PaulDepartment of Biotechnology, Daegu University, Kyoungsan, Kyoungbook 712-714, Republic of Korea.
Hee Eun KangDepartment of Pharmacology, College of Pharmacy, The Catholic University of Korea, Bucheon 420-743, Republic of Korea.
Ji Won JungDepartment of Pharmacology, College of Pharmacy, The Catholic University of Korea, Bucheon 420-743, Republic of Korea.
Sung-Young LeeThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Sung-Hyun KimThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Kanamata ReddyThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Young Il YeomBiomedical Genomics Research Center, Korea Research Institute of Bioscience & Biotechnology (KRIBB), Daejeon, 305-806, Korea.
Ann M BodeThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Zigang DongThe Hormel Institute, University of Minnesota, Austin, MN 55912, USA.
Hormel (United States) · USThe Catholic University of Korea Bucheon St. Mary's Hospital · KRYoungsan University · KRKorea Research Institute of Bioscience and Biotechnology · KRMokpo National University · KR

Funding

Chemoprevention of colon cancer by targeting the Wnt/beta-catenin pathwayR01CA187027 · NCI · UNIVERSITY OF MINNESOTA · PI KANG, NINGLING, ROH, EUNMIRI · 2015 to 2019
$1.7M
The role of histone phosphorylation in arsenic-induced cell transformation and skR01ES016548 · NIEHS · UNIVERSITY OF MINNESOTA · PI DONG, ZIGANG · 2008 to 2012
$1.7M
Developing new ornithine decarboxylase inhibitors to prevent skin & colon cancerR01CA166011 · NCI · UNIVERSITY OF MINNESOTA · PI DONG, ZIGANG · 2013 to 2017
$1.6M
Anticarcinogenic Mechanisms of Tea ConstituentsR37CA081064 · NCI · UNIVERSITY OF MINNESOTA · PI DONG, ZIGANG · 2008 to 2012
$1.5M
Inhibition of Carcinogenesis by Tea and Tea ConstituentsR01CA120388 · NCI · UNIVERSITY OF MINNESOTA · PI DONG, ZIGANG · 2006 to 2010
$1.3M
NCI NIH HHS CA120388NCI NIH HHS R01 CA120388NCI NIH HHS R01 CA166011NCI NIH HHS R01 CA187027NCI NIH HHS R37 CA081064NIEHS NIH HHS ES016548NIEHS NIH HHS R01 ES016548
6 · The paper itself

Abstract

Ornithine decarboxylase (ODC) is a rate-limiting enzyme in the first step of polyamine biosynthesis that is associated with cell growth and tumor formation. Existing catalytic inhibitors of ODC have lacked efficacy in clinical testing or displayed unacceptable toxicity. In this study, we report the identification of an effective and nontoxic allosteric inhibitor of ODC. Using computer docking simulation and an in vitro ODC enzyme assay, we identified herbacetin, a natural compound found in flax and other plants, as a novel ODC inhibitor. Mechanistic investigations defined aspartate 44 in ODC as critical for binding. Herbacetin exhibited potent anticancer activity in colon cancer cell lines expressing high levels of ODC. Intraperitoneal or oral administration of herbacetin effectively suppressed HCT116 xenograft tumor growth and also reduced the number and size of polyps in a mouse model of APC-driven colon cancer (ApcMin/+). Unlike the well-established ODC inhibitor DFMO, herbacetin treatment was not associated with hearing loss. Taken together, our findings defined the natural product herbacetin as an allosteric inhibitor of ODC with chemopreventive and antitumor activity in preclinical models of colon cancer, prompting its further investigation in clinical trials.

Indexed as

Allosteric RegulationAnimalsAnticarcinogenic AgentsAnti-Inflammatory Agents, Non-SteroidalAntineoplastic Agents, PhytogenicEflornithineFemaleFlavonoidsHCT116 CellsHearing LossHumansMaleMiceMice, Inbred C57BLOrnithine DecarboxylaseOrnithine Decarboxylase InhibitorsAnticarcinogenic AgentsAnti-Inflammatory Agents, Non-SteroidalAntineoplastic Agents, PhytogenicEflornithineFlavonoidsherbacetinOrnithine DecarboxylaseOrnithine Decarboxylase Inhibitors

Identifiers

PMID26676750
PMCPMC4775427
OpenAlexW2286360259

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.