Evidence map›Paper›PMID 26675234›Full record

ArticleJournal of cell science2016

Identification of RNF168 as a PML nuclear body regulator.

Kathy Shire, Andrew I Wong, Michael H Tatham, Oliver F Anderson, David Ripsman, Stephanie Gulstene, Jason Moffat, Ronald T Hay, Lori Frappier

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Early Nuclear Events after Herpesviral Infection.Journal of clinical medicine · 2019
    Review
  7. Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Kathy ShireDepartment of Molecular Genetics, University of Toronto, 1 Kings College Circle, Toronto, Ontario, Canada M5S 1A8.
Andrew I WongDepartment of Molecular Genetics, University of Toronto, 1 Kings College Circle, Toronto, Ontario, Canada M5S 1A8.
Michael H TathamCentre for Gene Regulation and Expression, College of Life Sciences, University of Dundee.
Oliver F AndersonCentre for Gene Regulation and Expression, College of Life Sciences, University of Dundee.
David RipsmanDepartment of Molecular Genetics, University of Toronto, 1 Kings College Circle, Toronto, Ontario, Canada M5S 1A8.
Stephanie GulsteneDepartment of Molecular Genetics, University of Toronto, 1 Kings College Circle, Toronto, Ontario, Canada M5S 1A8.
Jason MoffatDepartment of Molecular Genetics, University of Toronto, 1 Kings College Circle, Toronto, Ontario, Canada M5S 1A8.
Ronald T HayCentre for Gene Regulation and Expression, College of Life Sciences, University of Dundee.
Lori FrappierDepartment of Molecular Genetics, University of Toronto, 1 Kings College Circle, Toronto, Ontario, Canada M5S 1A8 lori.frappier@utoronto.ca.
University of Toronto · CAUniversity of Dundee · GBCanada Research Chairs · CA

Funding

Biotechnology and Biological Sciences Research CouncilCancer Research UK 13067Cancer Research UK 21747CIHRWellcome Trust 098391
6 · The paper itself

Abstract

Promyelocytic leukemia (PML) protein forms the basis of PML nuclear bodies (PML NBs), which control many important processes. We have screened an shRNA library targeting ubiquitin pathway proteins for effects on PML NBs, and identified RNF8 and RNF168 DNA-damage response proteins as negative regulators of PML NBs. Additional studies confirmed that depletion of either RNF8 or RNF168 increased the levels of PML NBs and proteins, whereas overexpression induced loss of PML NBs. RNF168 partially localized to PML NBs through its UMI/MIU1 ubiquitin-interacting region and associated with NBs formed by any PML isoform. The association of RNF168 with PML NBs resulted in increased ubiquitylation and SUMO2 modification of PML. In addition, RNF168 was found to associate with proteins modified by SUMO2 and/or SUMO3 in a manner dependent on its ubiquitin-binding sequences, suggesting that hybrid SUMO-ubiquitin chains can be bound. In vitro assays confirmed that RNF168, preferentially, binds hybrid SUMO2-K63 ubiquitin chains compared with K63-ubiquitin chains or individual SUMO2. Our study identified previously unrecognized roles for RNF8 and RNF168 in the regulation of PML, and a so far unknown preference of RNF168 for hybrid SUMO-ubiquitin chains.

Indexed as

Cell Line, TumorHumansIntranuclear Inclusion BodiesLeukemia, MyeloidNeoplasm ProteinsNuclear ProteinsPromyelocytic Leukemia ProteinProtein BindingProtein IsoformsSmall Ubiquitin-Related Modifier ProteinsTranscription FactorsTumor Suppressor ProteinsUbiquitinUbiquitinationUbiquitin-Protein LigasesNeoplasm ProteinsNuclear ProteinsPML protein, humanPromyelocytic Leukemia ProteinProtein IsoformsRNF168 protein, humanSmall Ubiquitin-Related Modifier ProteinsTranscription FactorsTumor Suppressor ProteinsUbiquitinUbiquitin-Protein LigasesPML nuclear bodiesRNF168RNF8SUMO

Identifiers

PMID26675234
PMCPMC4760303
OpenAlexW2316149683

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.