Evidence map›Paper›PMID 26674953›Full record

ArticleProceedings. Biological sciences2015

A horizontally transferred nuclear gene is associated with microhabitat variation in a natural plant population.

Honor C Prentice, Yuan Li, Mikael Lönn, Anders Tunlid, Lena Ghatnekar

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings. Biological sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Honor C PrenticeDepartment of Biology, Lund University, 223 62 Lund, Sweden honor_c.prentice@biol.lu.se.ORCID http://orcid.org/0000-0003-2548-0525
Yuan LiDepartment of Biology, Lund University, 223 62 Lund, Sweden.ORCID http://orcid.org/0000-0001-5846-3727
Mikael LönnSchool of Natural Sciences, Technology and Environmental Studies, Södertörn University, 141 89 Huddinge, Sweden.ORCID http://orcid.org/0000-0002-5013-6462
Anders TunlidDepartment of Biology, Lund University, 223 62 Lund, Sweden.
Lena GhatnekarDepartment of Biology, Lund University, 223 62 Lund, Sweden.
Lund University · SESödertörn University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Horizontal gene transfer involves the non-sexual interspecific transmission of genetic material. Even if they are initially functional, horizontally transferred genes are expected to deteriorate into non-expressed pseudogenes, unless they become adaptively relevant in the recipient organism. However, little is known about the distributions of natural transgenes within wild species or the adaptive significance of natural transgenes within wild populations. Here, we examine the distribution of a natural plant-to-plant nuclear transgene in relation to environmental variation within a wild population. Festuca ovina is polymorphic for an extra (second) expressed copy of the nuclear gene (PgiC) encoding cytosolic phosphoglucose isomerase, with the extra PgiC locus having been acquired horizontally from the distantly related grass genus Poa. We investigated variation at PgiC in samples of F. ovina from a fine-scale, repeating patchwork of grassland microhabitats, replicated within spatially separated sites. Even after accounting for spatial effects, the distributions of F. ovina individuals carrying the additional PgiC locus, and one of the enzyme products encoded by the locus, are significantly associated with fine-scale habitat variation. Our results suggest that the PgiC transgene contributes, together with the unlinked 'native' PgiC locus, to local adaptation to a fine-scale mosaic of edaphic and biotic grassland microhabitats.

Indexed as

EcosystemGenes, PlantGene Transfer, HorizontalFestucaGenetic VariationGlucose-6-Phosphate IsomeraseGrasslandSoilSwedenGlucose-6-Phosphate IsomeraseSoilFestuca ovinahabitat mosaichorizontal gene transferlocal adaptationnatural plant transgenephosphoglucose isomerase

Identifiers

PMID26674953
PMCPMC4707765
OpenAlexW2213501283

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.