Evidence map›Paper›PMID 26674869›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2015

Long Noncoding RNA FosDT Promotes Ischemic Brain Injury by Interacting with REST-Associated Chromatin-Modifying Proteins.

Suresh L Mehta, TaeHee Kim, Raghu Vemuganti

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 1 synthesis or guideline pooled it, 132 citations in OpenAlex.

  1. Pooled it
  2. CRISPR-Based Therapy for Ischemic Stroke: A Narrative Review.Cellular and molecular neurobiology · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Post-stroke brain can be protected by modulating the lncRNA FosDT.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Epigenetic mechanisms and potential therapeutic targets in stroke.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2022
    Review
  19. Epigenetic Modulation of Opioid Receptors by Drugs of Abuse.International journal of molecular sciences · 2022
    Review
  20. Review

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Suresh L MehtaDepartment of Neurological Surgery.
TaeHee KimDepartment of Neurological Surgery, Neuroscience Training Program, and.
Raghu VemugantiDepartment of Neurological Surgery, Neuroscience Training Program, and Cellular and Molecular Pathology Training Program, University of Wisconsin, Madison, Wisconsin 53792 Vemuganti@neurosurgery.wisc.edu.
Neurological Surgery · USUniversity of Wisconsin–Madison · US

Funding

LncRNA FosDT mediates ischemic brain damageR21NS095192 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI VEMUGANTI, RAGHU · 2015 to 2016
$558k
Synergy of ER stress and oxidative stress after TBIR21NS082957 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI VEMUGANTI, RAGHU · 2013 to 2014
$412k
miRNAs and PPAR-gamma-induced neuroprotectionR21NS079585 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI VEMUGANTI, RAGHU · 2012 to 2013
$406k
Combo therapy to curtail oxidative stress after TBIR03NS083007 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI VEMUGANTI, RAGHU · 2013 to 2014
$150k
NINDS NIH HHS R03 NS083007NINDS NIH HHS R03NS083007NINDS NIH HHS R21 NS079585NINDS NIH HHS R21NS079585NINDS NIH HHS R21 NS082957NINDS NIH HHS R21NS082957NINDS NIH HHS R21 NS095192NINDS NIH HHS R21NS095192
6 · The paper itself

Abstract

Ischemia induces extensive temporal changes in cerebral transcriptome that influences the neurologic outcome after stroke. In addition to protein-coding RNAs, many classes of noncoding RNAs, including long noncoding RNAs (LncRNAs), also undergo changes in the poststroke brain. We currently evaluated the functional significance of an LncRNA called Fos downstream transcript (FosDT) that is cogenic with Fos gene. Following transient middle cerebral artery occlusion (MCAO) in adult rats, expression of FosDT and Fos was induced. FosDT knockdown significantly ameliorated the postischemic motor deficits and reduced the infarct volume. Focal ischemia also increased FosDT binding to chromatin-modifying proteins (CMPs) Sin3a and coREST (corepressors of the transcription factor REST). Furthermore, FosDT knockdown derepressed REST-downstream genes GRIA2, NFκB2, and GRIN1 in the postischemic brain. Thus, FosDT induction and its interactions with REST-associated CMPs, and the resulting regulation of REST-downstream genes might modulate ischemic brain damage. LncRNAs, such as FosDT, can be therapeutically targeted to minimize poststroke brain damage. SIGNIFICANCE STATEMENT: Mammalian brain is abundantly enriched with long noncoding RNAs (LncRNAs). Functional roles of LncRNAs in normal and pathological states are not yet understood. This study identified that LncRNA FosDT induced after transient focal ischemia modulates poststroke behavioral deficits and brain damage. These effects of FosDT in part are due to its interactions with chromatin-modifying proteins Sin3a and coREST (corepressors of the transcription factor REST) and subsequent derepression of REST-downstream genes GRIA2, NFκB2, and GRIN1. Therefore, LncRNA-mediated epigenetic remodeling could determine stroke outcome.

Indexed as

AnimalsBrain IschemiaCo-Repressor ProteinsGene Expression RegulationGene Knockdown TechniquesGenes, fosGene SilencingInfarction, Middle Cerebral ArteryIschemic Attack, TransientMaleMovement DisordersPsychomotor PerformanceRatsRats, Inbred SHRRE1-Silencing Transcription FactorRepressor ProteinsCo-Repressor ProteinsCoREST protein, ratRE1-Silencing Transcription FactorRepressor ProteinsRNA, Long NoncodingSIN3A transcription factorSin3 Histone Deacetylase and Corepressor Complexbraingene expressionneuroprotectionnoncoding RNAstroketranscriptional regulation

Identifiers

PMID26674869
PMCPMC4679824
OpenAlexW2211662486

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.