Evidence map›Paper›PMID 26674342›Full record

ArticleBMB reports2016

A systematic study of nuclear interactome of C-terminal domain small phosphatase-like 2 using inducible expression system and shotgun proteomics.

NaNa Kang, JaeHyung Koo, Sen Wang, Sun Jin Hur, Young Yil Bahk

Open access · goldAbstract readNews
In one paragraph

Article in BMB reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

NaNa KangDepartment of Brain & Cognitive Sciences, DGIST, Daegu 42988, Korea.
JaeHyung KooDepartment of Brain & Cognitive Sciences, DGIST, Daegu 42988, Korea.
Sen WangQiqihar Medical University, Qiqihar City, Heilongjiang, 161006, China.
Sun Jin HurDepartment of Animal Science and Technology, Chung-Ang University, Anseong 17546, Korea.
Young Yil BahkDepartment of Biotechnology, Konkuk University, Chungju 27478, Korea.
Daegu Gyeongbuk Institute of Science and Technology · KRChung-Ang University · KRKonkuk University · KRQiqihar Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA polymerase II C-terminal domain phosphatases are newly emerging family of phosphatases that contain FCPH domain with Mg+2-binding DXDX(T/V) signature motif. Its subfamily includes small CTD phosphatases (SCPs). Recently, we identified several interacting partners of human SCP1 with appearance of dephosphorylation and O-GlcNAcylation. In this study, using an established cell line with inducible CTDSPL2 protein (a member of the new phosphatase family), proteomic screening was conducted to identify binding partners of CTDSPL2 in nuclear extract through immunoprecipitation of CTDSPL2 with its associated. This approach led to the identification of several interacting partners of CTDSPL2. This will provide a better understanding on CTDSPL2. [BMB Reports 2016; 49(6): 319-324].

Indexed as

Protein Interaction MappingCell NucleusChromatography, AffinityHEK293 CellsHumansImmunoprecipitationPhosphoprotein PhosphatasesProtein BindingProteomicsReproducibility of ResultsSubcellular Fractionscarboxy-terminal domain phosphatasePhosphoprotein Phosphatases

Identifiers

PMID26674342
PMCPMC5070719
OpenAlexW2405183591

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.