Evidence map›Paper›PMID 26673719›Full record

ArticleNucleic acids research2016

Functional dissection of a plant Argonaute.

Károly Fátyol, Márta Ludman, József Burgyán

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
10.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Interspecies Communication in Holobionts by Non-Coding RNA Exchange.International journal of molecular sciences · 2020
    Review
  16. Article
  17. RNA silencing ofBiotechnology reports (Amsterdam, Netherlands) · 2019
    Article
  18. Article
  19. Extensive profiling inRNA (New York, N.Y.) · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Károly FátyolAgricultural Biotechnology Institute, National Agricultural Research and Innovation Centre Szent-Györgyi Albert u. 4. Gödöllő 2100, Hungary kfatyol@gmail.com.
Márta LudmanAgricultural Biotechnology Institute, National Agricultural Research and Innovation Centre Szent-Györgyi Albert u. 4. Gödöllő 2100, Hungary.
József BurgyánAgricultural Biotechnology Institute, National Agricultural Research and Innovation Centre Szent-Györgyi Albert u. 4. Gödöllő 2100, Hungary burgyan@abc.hu.
Agricultural Biotechnology Institute · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA guided ribonuclease complexes play central role in RNA interference. Members of the evolutionarily conserved Argonaute protein family form the catalytic cores of these complexes. Unlike a number of other plant Argonautes, the role of AGO2 has been obscure until recently. Newer data, however, have indicated its involvement in various biotic and abiotic stress responses. Despite its suggested importance, there is no detailed characterization of this protein to date. Here we report cloning and molecular characterization of the AGO2 protein of the virological model plant Nicotiana benthamiana. We show that AGO2 can directly repress translation via various miRNA target site constellations (ORF, 3' UTR). Interestingly, although AGO2 seems to be able to silence gene expression in a slicing independent fashion, its catalytic activity is still a prerequisite for efficient translational repression. Additionally, mismatches between the 3' end of the miRNA guide strand and the 5' end of the target site enhance gene silencing by AGO2. Several functionally important amino acid residues of AGO2 have been identified that affect its small RNA loading, cleavage activity, translational repression potential and antiviral activity. The data presented here help us to understand how AGO2 aids plants to deal with stress.

Indexed as

Gene Expression Regulation, Plant3' Untranslated RegionsAmino Acid SequenceArgonaute ProteinsBase SequenceBlotting, NorthernBlotting, WesternHost-Pathogen InteractionsMicroRNAsMolecular Sequence DataMutationNicotianaPhylogenyPlant ProteinsPlants, Genetically ModifiedPlant Viruses3' Untranslated RegionsArgonaute ProteinsMicroRNAsPlant ProteinsProtein IsoformsRNA, Small InterferingRNA, Viral

Identifiers

PMID26673719
PMCPMC4756824
OpenAlexW2230937388

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.