Evidence map›Paper›PMID 26672043›Full record

ArticlePhysiological genomics2016

Integrative mRNA-microRNA analyses reveal novel interactions related to insulin sensitivity in human adipose tissue.

Tyler J Kirby, R Grace Walton, Brian Finlin, Beibei Zhu, Resat Unal, Neda Rasouli, Charlotte A Peterson, Philip A Kern

Open access · bronzeAbstract read
In one paragraph

Article in Physiological genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. MicroRNAs: The Link between the Metabolic Syndrome and Oncogenesis.International journal of molecular sciences · 2021
    Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Epigenetics of chronic inflammatory diseases.Journal of inflammation research · 2019
    Review
  11. Article
  12. Article
  13. Regulatory Roles of MicroRNAs in Diabetes.International journal of molecular sciences · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Tyler J KirbyCollege of Health Sciences, University of Kentucky, Lexington, Kentucky;
R Grace WaltonCollege of Health Sciences, University of Kentucky, Lexington, Kentucky;
Brian FinlinDepartment of Medicine, Division of Endocrinology, and Barnstable Brown Diabetes and Obesity Center; University of Kentucky, Lexington, Kentucky; and.
Beibei ZhuDepartment of Medicine, Division of Endocrinology, and Barnstable Brown Diabetes and Obesity Center; University of Kentucky, Lexington, Kentucky; and.
Resat UnalDepartment of Medicine, Division of Endocrinology, and Barnstable Brown Diabetes and Obesity Center; University of Kentucky, Lexington, Kentucky; and.
Neda RasouliDepartment of Internal Medicine, Division of Endocrinology, University of Colorado, Aurora, Colorado.
Charlotte A PetersonCollege of Health Sciences, University of Kentucky, Lexington, Kentucky;
Philip A KernDepartment of Medicine, Division of Endocrinology, and Barnstable Brown Diabetes and Obesity Center; University of Kentucky, Lexington, Kentucky; and philipkern@uky.edu.
University of Kentucky · USUniversity of Colorado Anschutz Medical Campus · US

Funding

The role of IKKß in linking obesity to adipose tissue inflammation and adipogeneP20GM103527 · NIGMS · UNIVERSITY OF KENTUCKY · PI CASSIS, LISA A · 2012 to 2017
$13.7M
Kentucky Center for Clinical and Translational ScienceUL1TR000117 · NCATS · UNIVERSITY OF KENTUCKY · PI KERN, PHILIP A · 2012 to 2015
$13.3M
Mechanisms Underlying Metabolic Syndrome in ObesityR01DK071349 · NIDDK · UNIVERSITY OF KENTUCKY · PI KERN, PHILIP A, PETERSON, CHARLOTTE A. · 2005 to 2013
$2.3M
NCATS NIH HHS UL1 TR000117NIDDK NIH HHS DK-071349NIDDK NIH HHS R01 DK071349NIGMS NIH HHS P20 GM103527
6 · The paper itself

Abstract

Adipose tissue has profound effects on whole-body insulin sensitivity. However, the underlying biological processes are quite complex and likely multifactorial. For instance, the adipose transcriptome is posttranscriptionally modulated by microRNAs, but the relationship between microRNAs and insulin sensitivity in humans remains to be determined. To this end, we utilized an integrative mRNA-microRNA microarray approach to identify putative molecular interactions that regulate the transcriptome in subcutaneous adipose tissue of insulin-sensitive (IS) and insulin-resistant (IR) individuals. Using the NanoString nCounter Human v1 microRNA Expression Assay, we show that 17 microRNAs are differentially expressed in IR vs. IS. Of these, 16 microRNAs (94%) are downregulated in IR vs. IS, including miR-26b, miR-30b, and miR-145. Using Agilent Human Whole Genome arrays, we identified genes that were predicted targets of miR-26b, miR-30b, and miR-145 and were upregulated in IR subjects. This analysis produced ADAM22, MYO5A, LOX, and GM2A as predicted gene targets of these microRNAs. We then validated that miR-145 and miR-30b regulate these mRNAs in differentiated human adipose stem cells. We suggest that use of bioinformatic integration of mRNA and microRNA arrays yields verifiable mRNA-microRNA pairs that are associated with insulin resistance and can be validated in vitro.

Indexed as

Insulin ResistanceADAM ProteinsAdipose TissueCluster AnalysisGene Expression ProfilingGene Expression RegulationGenome, HumanG(M2) Activator ProteinHumansInsulinMicroRNAsMyosin Heavy ChainsMyosin Type VNerve Tissue ProteinsOligonucleotide Array Sequence AnalysisRNA, MessengerADAM22 protein, humanADAM ProteinsG(M2) Activator ProteinInsulinMicroRNAsMIRN145 microRNA, humanMIRN26 microRNA, humanMIRN30b microRNA, humanMYO5A protein, humanMyosin Heavy ChainsMyosin Type VNerve Tissue ProteinsOLR1 protein, humanRNA, MessengerScavenger Receptors, Class Eadiposeinsulin sensitivitymicroarraymicroRNA

Identifiers

PMID26672043
PMCPMC4729698
OpenAlexW2217323971

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.