Evidence map›Paper›PMID 26671595›Full record

ArticleMolecular cancer2015

t(15;21) translocations leading to the concurrent downregulation of RUNX1 and its transcription factor partner genes SIN3A and TCF12 in myeloid disorders.

Alberto L'Abbate, Doron Tolomeo, Francesca De Astis, Angelo Lonoce, Crocifissa Lo Cunsolo, Dominique Mühlematter, Jacqueline Schoumans, Peter Vandenberghe, Achilles Van Hoof, Orazio Palumbo and 3 more

Open access · goldAbstract read
In one paragraph

Article in Molecular cancer, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. RUNX1: A Regulator of NF-kB Signaling in Pulmonary Diseases.Current protein & peptide science · 2018
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Alberto L'AbbateDepartment of Biology, University of Bari, Bari, Italy.
Doron TolomeoDepartment of Biology, University of Bari, Bari, Italy.
Francesca De AstisDepartment of Biology, University of Bari, Bari, Italy.
Angelo LonoceDepartment of Biology, University of Bari, Bari, Italy.
Crocifissa Lo CunsoloUO Anatomia Patologica, Ospedale S. Martino, Belluno, Italy.
Dominique MühlematterUnité de génétique du cancer, Service de génétique médicale, Centre Hospitalier Universitaire Vaudois CHUV, Lausanne, Switzerland.
Jacqueline SchoumansUnité de génétique du cancer, Service de génétique médicale, Centre Hospitalier Universitaire Vaudois CHUV, Lausanne, Switzerland.
Peter VandenbergheCenter for Human Genetics and Department of Hematology, University Hospital Leuven and KU Leuven, Leuven, Belgium.
Achilles Van HoofDepartment of Haematology, AZ Sint-Jan AV, Brugge, Belgium.
Orazio PalumboMedical Genetics Unit, IRCCS Casa Sollievo della Sofferenza Hospital, San Giovanni Rotondo, Italy.
Massimo CarellaMedical Genetics Unit, IRCCS Casa Sollievo della Sofferenza Hospital, San Giovanni Rotondo, Italy.
Tommaso MazzaIRCCS Casa Sollievo della Sofferenza, Mendel Institute, San Giovanni Rotondo, Italy.
Clelia Tiziana StorlazziDepartment of Biology, University of Bari, Bari, Italy. cleliatiziana.storlazzi@uniba.it.
University of Bari Aldo Moro · ITCasa Sollievo della Sofferenza · ITUniversity Hospital of Lausanne · CHAZ Sint-Jan · BEIstituti di Ricovero e Cura a Carattere Scientifico · ITKU Leuven · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Through a combined approach integrating RNA-Seq, SNP-array, FISH and PCR techniques, we identified two novel t(15;21) translocations leading to the inactivation of RUNX1 and its partners SIN3A and TCF12. One is a complex t(15;21)(q24;q22), with both breakpoints mapped at the nucleotide level, joining RUNX1 to SIN3A and UBL7-AS1 in a patient with myelodysplasia. The other is a recurrent t(15;21)(q21;q22), juxtaposing RUNX1 and TCF12, with an opposite transcriptional orientation, in three myeloid leukemia cases. Since our transcriptome analysis indicated a significant number of differentially expressed genes associated with both translocations, we speculate an important pathogenetic role for these alterations involving RUNX1.

Indexed as

Base SequenceBasic Helix-Loop-Helix ProteinsCore Binding Factor Alpha 2 SubunitDown-RegulationHumansLeukemia, MyeloidRepressor ProteinsSequence Analysis, DNASin3 Histone Deacetylase and Corepressor ComplexTranslocation, GeneticBasic Helix-Loop-Helix ProteinsCore Binding Factor Alpha 2 SubunitRepressor ProteinsRUNX1 protein, humanSIN3A transcription factorSin3 Histone Deacetylase and Corepressor ComplexTCF12 protein, human

Identifiers

PMID26671595
PMCPMC4681058
OpenAlexW2215413462

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.