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ArticleScientific reports2015

TP53 Mutational Analysis Enhances the Prognostic Accuracy of IHC4 and PAM50 Assays.

Ching-Hung Lin, I-Chiun Chen, Chiun-Sheng Huang, Fu-Chang Hu, Wen-Hung Kuo, Kuan-Ting Kuo, Chung-Chieh Wang, Pei-Fang Wu, Dwan-Ying Chang, Ming-Yang Wang and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Association ofGenes · 2021
    Article
  4. Detection of somaticHeliyon · 2020
    Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Ching-Hung LinDepartment of Oncology, National Taiwan University Hospital, Taipei, Taiwan.
I-Chiun ChenDepartment of Oncology, National Taiwan University Hospital, Taipei, Taiwan.
Chiun-Sheng HuangDepartment of Surgery, National Taiwan University Hospital, Taipei, Taiwan.
Fu-Chang HuGraduate Institute of Clinical Medicine and School of Nursing, College of Medicine, National Taiwan University, Taipei, Taiwan.
Wen-Hung KuoDepartment of Surgery, National Taiwan University Hospital, Taipei, Taiwan.
Kuan-Ting KuoDepartment of Pathology, National Taiwan University Hospital, Taipei, Taiwan.
Chung-Chieh WangDepartment of Pathology, National Taiwan University Hospital, Taipei, Taiwan.
Pei-Fang WuDepartment of Oncology, National Taiwan University Hospital, Taipei, Taiwan.
Dwan-Ying ChangDepartment of Oncology, National Taiwan University Hospital, Taipei, Taiwan.
Ming-Yang WangDepartment of Surgery, National Taiwan University Hospital, Taipei, Taiwan.
Chin-Hao ChangDepartment of Medical Research, National Taiwan University Hospital, Taipei, Taiwan.
Wei-Wu ChenDepartment of Oncology, National Taiwan University Hospital, Taipei, Taiwan.
Yen-Shen LuDepartment of Oncology, National Taiwan University Hospital, Taipei, Taiwan.
Ann-Lii ChengDepartment of Oncology, National Taiwan University Hospital, Taipei, Taiwan.
National Taiwan University Hospital · TWNational Taiwan University · TW

Funding

Cancer Research UK
6 · The paper itself

Abstract

IHC4 and PAM50 assays have been shown to provide additional prognostic information for patients with early breast cancer. We evaluated whether incorporating TP53 mutation analysis can further enhance their prognostic accuracy. We examined TP53 mutation and the IHC4 score in tumors of 605 patients diagnosed with stage I-III breast cancer at National Taiwan University Hospital (the NTUH cohort). We obtained information regarding TP53 mutation and PAM50 subtypes in 699 tumors from the Molecular Taxonomy of Breast Cancer International Consortium (METABRIC) cohort. We found that TP53 mutation was significantly associated with high-risk IHC4 group and with luminal B, HER2-enriched, and basal-like subtypes. Despite the strong associations, TP53 mutation independently predicted shorter relapse-free survival (hazard ratio [HR] = 1.63, P = 0.007) in the NTUH cohort and shorter breast cancer-specific survival (HR = 2.35, P = <0.001) in the METABRIC cohort. TP53 mutational analysis added significant prognostic information in addition to the IHC4 score (∆ LR-χ(2) = 8.61, P = 0.002) in the NTUH cohort and the PAM50 subtypes (∆ LR-χ(2) = 18.9, P = <0.001) in the METABRIC cohort. We conclude that incorporating TP53 mutation analysis can enhance the prognostic accuracy of the IHC4 and PAM50 assays.

Indexed as

Biomarkers, TumorMutationAdultAgedAged, 80 and overBreast NeoplasmsCohort StudiesDNA Mutational AnalysisFemaleGene Expression ProfilingHumansImmunohistochemistryKaplan-Meier EstimateMiddle AgedNeoplasm GradingNeoplasm StagingBiomarkers, TumorTumor Suppressor Protein p53

Identifiers

PMID26671300
PMCPMC4680865
OpenAlexW2219995423

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.