Evidence map›Paper›PMID 26670603›Full record

ArticleFood and environmental virology2016

A 1-Year Study on the Detection of Human Enteric Viruses in New Caledonia.

Laetitia Kaas, Ann-Claire Gourinat, Florence Urbès, Jérémie Langlet

Abstract read
PubMed Publisher
In one paragraph

Article in Food and environmental virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Occurrence of Hepatitis A Virus in Water Matrices: A Systematic Review and Meta-Analysis.International journal of environmental research and public health · 2023
    Pooled it
  2. Article
  3. Article
  4. Review
  5. Microbiological assessment of an urban lagoon system in the coastal zone of Rio de Janeiro, Brazil.Environmental science and pollution research international · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Preliminary evaluation of BioFire FilmArrayEnvironmental science and pollution research international · 2018
    Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Laetitia KaasEnvironmental and Food Virology Laboratory, Institute of Environmental Science & Research Ltd. (ESR), Kenepuru Science Centre, PO Box 50-348, Porirua, 5240, New Zealand.
Ann-Claire GourinatInstitut Pasteur de Nouvelle-Calédonie, Nouméa, New Caledonia.
Florence UrbèsInstitut Pasteur de Nouvelle-Calédonie, Nouméa, New Caledonia.
Jérémie LangletEnvironmental and Food Virology Laboratory, Institute of Environmental Science & Research Ltd. (ESR), Kenepuru Science Centre, PO Box 50-348, Porirua, 5240, New Zealand. Jeremie.Langlet@esr.cri.nz.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human enteric viruses occur in high concentrations in wastewater and can contaminate receiving environmental waters. Due to the lack of data on the prevalence of enteric viruses in New Caledonia, the presence and the concentrations of enteric viruses in wastewater and seawater were determined. Untreated wastewater and seawater samples were collected monthly for 1 year from a wastewater treatment plant (WWTP) and from the WWTP's outlet, located directly on a popular recreational beach. Samples were tested for norovirus genogroups I and II (NoV GI and GII), astroviruses (AsV), sapoviruses (SaV), enteroviruses (EV), hepatitis A viruses (HAV), rotaviruses (RoV), human adenoviruses (HAdV) and human polyomaviruses (HPyV). To support these data, faecal samples from cases of gastroenteritis were tested for the first time for NoV and detected in the population. NoV GI, NoV GII, EV, SaV, HAdV and HPyV were detected in all wastewaters, RoV in 75% and AsV in 67%. HAV were not detected in wastewater. Overall, 92% of seawater samples were positive for at least one virus. HPyV were detected most frequently in 92% of samples and at concentrations up to 7.7 × 10(3) genome copies/L. NoV GI, NoV GII, EV, SaV, RoV and HAdV were found in 33, 66, 41, 33, 16 and 66% of seawater samples, respectively. AsV were not detected in seawater. This study reports for the first time the presence of NoV and other enteric viruses in New Caledonia and highlights the year-round presence of enteric viruses in the seawater of a popular beach.

Indexed as

EnterovirusFecesGastroenteritisHumansNew CaledoniaSeawaterWastewaterWastewaterEnteric virusesNorovirusQuantitative PCRRecreational waterWastewater

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.