Evidence map›Paper›PMID 26669440›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Casein kinase II promotes target silencing by miRISC through direct phosphorylation of the DEAD-box RNA helicase CGH-1.

Amelia F Alessi, Vishal Khivansara, Ting Han, Mallory A Freeberg, James J Moresco, Patricia G Tu, Eric Montoye, John R Yates, Xantha Karp, John K Kim

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. PLK1 Regulates MicroRNA Biogenesis through Drosha Phosphorylation.International journal of molecular sciences · 2023
    Article
  8. microPublication biology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. The multifaceted roles of microRNAs in differentiation.Current opinion in cell biology · 2020
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Amelia F AlessiLife Sciences Institute, University of Michigan, Ann Arbor, MI 48109; Department of Human Genetics, University of Michigan, Ann Arbor, MI 48109;
Vishal KhivansaraLife Sciences Institute, University of Michigan, Ann Arbor, MI 48109;
Ting HanLife Sciences Institute, University of Michigan, Ann Arbor, MI 48109;
Mallory A FreebergLife Sciences Institute, University of Michigan, Ann Arbor, MI 48109; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109;
James J MorescoDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA 92037;
Patricia G TuDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA 92037;
Eric MontoyeDepartment of Biology, Central Michigan University, Mount Pleasant, MI 48859.
John R YatesDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA 92037;
Xantha KarpDepartment of Biology, Central Michigan University, Mount Pleasant, MI 48859.
John K KimLife Sciences Institute, University of Michigan, Ann Arbor, MI 48109; Department of Human Genetics, University of Michigan, Ann Arbor, MI 48109; jnkim@jhu.edu.
University of Michigan–Ann Arbor · USScripps Research Institute · USCentral Michigan University · US

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI DAVIS, TRACY · 1996 to 2011
$24.7M
TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Regulation of Gene Expression by microRNAs in C. elegansR01GM088565 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KIM, JOHN · 2009 to 2013
$1.4M
NCRR NIH HHS 5P41RR011823NCRR NIH HHS P41 RR011823NIGMS NIH HHS 8 P41 GM103533NIGMS NIH HHS GM088565NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R01 GM088565NIGMS NIH HHS T32 GM007544NIH HHS P40 OD010440
6 · The paper itself

Abstract

MicroRNAs (miRNAs) play essential, conserved roles in diverse developmental processes through association with the miRNA-induced silencing complex (miRISC). Whereas fundamental insights into the mechanistic framework of miRNA biogenesis and target gene silencing have been established, posttranslational modifications that affect miRISC function are less well understood. Here we report that the conserved serine/threonine kinase, casein kinase II (CK2), promotes miRISC function in Caenorhabditis elegans. CK2 inactivation results in developmental defects that phenocopy loss of miRISC cofactors and enhances the loss of miRNA function in diverse cellular contexts. Whereas CK2 is dispensable for miRNA biogenesis and the stability of miRISC cofactors, it is required for efficient miRISC target mRNA binding and silencing. Importantly, we identify the conserved DEAD-box RNA helicase, CGH-1/DDX6, as a key CK2 substrate within miRISC and demonstrate phosphorylation of a conserved N-terminal serine is required for CGH-1 function in the miRNA pathway.

Indexed as

RNA InterferenceAnimalsAnimals, Genetically ModifiedBlotting, WesternCaenorhabditis elegansCaenorhabditis elegans ProteinsCasein Kinase IIDEAD-box RNA HelicasesGene Expression ProfilingMicroRNAsOligonucleotide Array Sequence AnalysisPhosphorylationProtein BindingRNA-Induced Silencing ComplexRNA, MessengerRNA NucleotidyltransferasesCaenorhabditis elegans ProteinsCasein Kinase IIcgh-1 protein, C elegansDEAD-box RNA HelicasesMicroRNAsRNA-Induced Silencing ComplexRNA, MessengerRNA NucleotidyltransferasesSerinecasein kinase IICGH-1microRNAmiRISCphosphorylation

Identifiers

PMID26669440
PMCPMC4702986
OpenAlexW2218859889

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.