Evidence map›Paper›PMID 26667652›Full record

ArticleBMC research notes2015

No evidence for viral sequences in five lepidic adenocarcinomas (former "BAC") by a high-throughput sequencing approach.

Nicolas Berthet, Lionel Frangeul, Ken André Olaussen, Elisabeth Brambilla, Nicolas Dorvault, Philippe Girard, Pierre Validire, Elie Fadel, Christiane Bouchier, Antoine Gessain and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 1 country.

Nicolas BerthetEpidemiology and Physiopathology of Oncogenic Viruses Unit, Institut Pasteur, 28 rue du Docteur Roux, 75015, Paris, France. nicolas.berthet@ird.fr.
Lionel FrangeulViruses and RNAi Unit, Institut Pasteur, 28 rue du Docteur Roux, 75015, Paris, France. lionel.frangeul@pasteur.fr.
Ken André OlaussenINSERM - U981, 94805, Villejuif, France. Ken.OLAUSSEN@gustaveroussy.fr.
Elisabeth BrambillaINSERM U823, Institut Albert Bonniot-Université Joseph Fourier, Grenoble Cedex 09, France. EBrambilla@chu-grenoble.fr.
Nicolas DorvaultINSERM - U981, 94805, Villejuif, France. Nicolas.DORVAULT@gustaveroussy.fr.
Philippe GirardDépartement thoracique, Institut Mutualiste Montsouris, 42 Boulevard Jourdan, 75014, Paris, France. philippe.girard@imm.fr.
Pierre ValidireDépartement d'anatomie pathologique, Institut Mutualiste Montsouris, 42 Boulevard Jourdan, 75014, Paris, France. Pierre.Validire@imm.fr.
Elie FadelINSERM, U999, 92350, Le Plessis-Robinson, France. e.fadel@ccml.fr.
Christiane BouchierPlateforme de Génomique, Institut Pasteur, 28 rue du Docteur Roux, 75015, Paris, France. christiane.bouchier@pasteur.fr.
Antoine GessainEpidemiology and Physiopathology of Oncogenic Viruses Unit, Institut Pasteur, 28 rue du Docteur Roux, 75015, Paris, France. antoine.gessain@pasteur.fr.
Jean-Charles SoriaINSERM - U981, 94805, Villejuif, France. Jean-Charles.Soria@gustaveroussy.fr.
Institut Pasteur · FRInserm · FRInstitute Mutualiste Montsouris · FRAR2i · FRCentre National de la Recherche Scientifique · FRInstitut Gustave Roussy · FRInstitut pour l'avancée des biosciences · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe hypothesis of an infectious etiology of the formerly named bronchiolo-alveolar carcinoma (BAC) has raised controversy. We investigated tumor lung tissues from five patients with former BAC histology using high-throughput sequencing technologies to discover potential viruses present in this type of lung cancer. Around 180 million single reads of 100 bases were generated for each BAC sample.

resultsNone of the reads showed a significant similarity for Jaagsiekte sheep retrovirus (JSRV) and no other viruses were found except for endogenous retroviruses.

conclusionsIn conclusion, we have demonstrated the absence of JSRV and other known human viruses in five samples of well-characterized lepidic adenocarcinoma.

Indexed as

AdenocarcinomaAdenocarcinoma, Bronchiolo-AlveolarAgedAnimalsEndogenous RetrovirusesFemaleHigh-Throughput Nucleotide SequencingHumansJaagsiekte sheep retrovirusLungLung NeoplasmsMaleMiddle AgedPulmonary Adenomatosis, OvineSheep

Identifiers

PMID26667652
PMCPMC4678645
OpenAlexW2216886337

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.