Evidence map›Paper›PMID 26666972›Full record

ArticleMolecular plant pathology2016

Carbon regulation of environmental pH by secreted small molecules that modulate pathogenicity in phytopathogenic fungi.

Fangcheng Bi, Shiri Barad, Dana Ment, Neta Luria, Amit Dubey, Virginia Casado, Nofar Glam, Jose Diaz Mínguez, Eduardo A Espeso, Robert Fluhr and 1 more

Abstract read
In one paragraph

Article in Molecular plant pathology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Insights into the Adaptation ofJournal of fungi (Basel, Switzerland) · 2026
    Article
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  7. Article
  8. ComparativeMicroorganisms · 2022
    Article
  9. Production of Primary Metabolites byMolecules (Basel, Switzerland) · 2022
    Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. The Effect of Environmental pH duringAntioxidants (Basel, Switzerland) · 2021
    Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Fangcheng BiDepartment of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel.
Shiri BaradDepartment of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel.
Dana MentDepartment of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel.
Neta LuriaDepartment of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel.
Amit DubeyDepartment of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel.
Virginia CasadoDepartment of Microbiology and Genetics, CIALE, Universidad de Salamanca, Salamanca, 37007, Spain.
Nofar GlamDepartment of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel.
Jose Diaz MínguezDepartment of Microbiology and Genetics, CIALE, Universidad de Salamanca, Salamanca, 37007, Spain.
Eduardo A EspesoDepartment of Molecular and Cellular Biology, Centro de Investigaciones Biológicas (C.I.B.), Madrid, 28040, Spain.
Robert FluhrDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.
Dov PruskyDepartment of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel. dovprusk@volcani.agri.gov.il.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fruit pathogens can contribute to the acidification or alkalinization of the host environment. This capability has been used to divide fungal pathogens into acidifying and/or alkalinizing classes. Here, we show that diverse classes of fungal pathogens-Colletotrichum gloeosporioides, Penicillium expansum, Aspergillus nidulans and Fusarium oxysporum-secrete small pH-affecting molecules. These molecules modify the environmental pH, which dictates acidic or alkaline colonizing strategies, and induce the expression of PACC-dependent genes. We show that, in many organisms, acidification is induced under carbon excess, i.e. 175 mm sucrose (the most abundant sugar in fruits). In contrast, alkalinization occurs under conditions of carbon deprivation, i.e. less than 15 mm sucrose. The carbon source is metabolized by glucose oxidase (gox2) to gluconic acid, contributing to medium acidification, whereas catalysed deamination of non-preferred carbon sources, such as the amino acid glutamate, by glutamate dehydrogenase 2 (gdh2), results in the secretion of ammonia. Functional analyses of Δgdh2 mutants showed reduced alkalinization and pathogenicity during growth under carbon deprivation, but not in high-carbon medium or on fruit rich in sugar, whereas analysis of Δgox2 mutants showed reduced acidification and pathogencity under conditions of excess carbon. The induction pattern of gdh2 was negatively correlated with the expression of the zinc finger global carbon catabolite repressor creA. The present results indicate that differential pH modulation by fruit fungal pathogens is a host-dependent mechanism, affected by host sugar content, that modulates environmental pH to enhance fruit colonization.

Indexed as

EnvironmentAlkaliesCarbonExtracellular SpaceFruitFungiGene Expression Regulation, FungalHydrogen-Ion ConcentrationMetabolomeAlkaliesCarboncarbon regulation of pathogenicitypathogenicitypH regulation

Identifiers

PMID26666972
PMCPMC6638356

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.