Evidence map›Paper›PMID 26664688›Full record

ArticleEcology and evolution2015

Genome-wide analyses suggest parallel selection for universal traits may eclipse local environmental selection in a highly mobile carnivore.

Astrid Vik Stronen, Bogumiła Jędrzejewska, Cino Pertoldi, Ditte Demontis, Ettore Randi, Magdalena Niedziałkowska, Tomasz Borowik, Vadim E Sidorovich, Josip Kusak, Ilpo Kojola and 4 more

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 11 institutions in 11 countries.

Astrid Vik StronenSection of Biology and Environmental Science Department of Chemistry and Bioscience Aalborg University Fredrik Bajers Vej 7H DK-9220 Aalborg Øst Denmark ; Mammal Research Institute Polish Academy of Sciences ul. Waszkiewicza 1 PL 17-230 Bialowieza Poland.
Bogumiła JędrzejewskaMammal Research Institute Polish Academy of Sciences ul. Waszkiewicza 1 PL 17-230 Bialowieza Poland.
Cino PertoldiSection of Biology and Environmental Science Department of Chemistry and Bioscience Aalborg University Fredrik Bajers Vej 7H DK-9220 Aalborg Øst Denmark ; Aalborg Zoo Mølleparkvej 63 DK-9000 Aalborg Denmark.
Ditte DemontisDepartment of Human Genetics University of Aarhus Wilhelm Meyers Allé DK-8000 Aarhus Denmark.
Ettore RandiSection of Biology and Environmental Science Department of Chemistry and Bioscience Aalborg University Fredrik Bajers Vej 7H DK-9220 Aalborg Øst Denmark ; Laboratorio di Genetica ISPRA via Cà Fornacetta 9 I-40064 Ozzano Emilia (BO) Italy.
Magdalena NiedziałkowskaMammal Research Institute Polish Academy of Sciences ul. Waszkiewicza 1 PL 17-230 Bialowieza Poland.
Tomasz BorowikMammal Research Institute Polish Academy of Sciences ul. Waszkiewicza 1 PL 17-230 Bialowieza Poland.
Vadim E SidorovichInstitute of Zoology Scientific and Practical Centre for Biological Resources National Academy of Science of Belarus Akademicheskaya Str 27 220072 Minsk Belarus.
Josip KusakDepartment of Biology Faculty of Veterinary Medicine University of Zagreb Zagreb Croatia.
Ilpo KojolaNatural Resources Institute Finland Box 16 FI-96500 Rovaniemi Finland.
Alexandros A KaramanlidisARCTUROS Civil Society for the Protection and Management of Wildlife and the Natural Environment GR-53075 Aetos Greece ; Department of Ecology and Natural Resources Management Norwegian University of Life Sciences NO-1432 Ås Norway.
Janis OzolinsLatvian State Forest Research Institute "Silava" Rīgas 111 LV-2169 Salaspils Latvia.
Vitalii DumenkoBiosphere Reserve Askania Nova Frunze Str. 13 Askania-Nova Chaplynka District Kherson Region 75230 Ukraine.
Sylwia D CzarnomskaMammal Research Institute Polish Academy of Sciences ul. Waszkiewicza 1 PL 17-230 Bialowieza Poland.
Polish Academy of Sciences · PLMammal Research Institute · PLAalborg ZooAarhus University · DKASKA Pharmaceutical (Japan) · JPIstituto Superiore per la Protezione e la Ricerca Ambientale · ITLatvian State Forest Research Institute "Silava" · LVNational Academy of Sciences of Belarus · BYNatural Resources Institute Finland · FINorwegian University of Life Sciences · NOUniversity of Zagreb · HR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ecological and environmental heterogeneity can produce genetic differentiation in highly mobile species. Accordingly, local adaptation may be expected across comparatively short distances in the presence of marked environmental gradients. Within the European continent, wolves (Canis lupus) exhibit distinct north-south population differentiation. We investigated more than 67-K single nucleotide polymorphism (SNP) loci for signatures of local adaptation in 59 unrelated wolves from four previously identified population clusters (northcentral Europe n = 32, Carpathian Mountains n = 7, Dinaric-Balkan n = 9, Ukrainian Steppe n = 11). Our analyses combined identification of outlier loci with findings from genome-wide association study of individual genomic profiles and 12 environmental variables. We identified 353 candidate SNP loci. We examined the SNP position and neighboring megabase (1 Mb, one million bases) regions in the dog (C. lupus familiaris) genome for genes potentially under selection, including homologue genes in other vertebrates. These regions included functional genes for, for example, temperature regulation that may indicate local adaptation and genes controlling for functions universally important for wolves, including olfaction, hearing, vision, and cognitive functions. We also observed strong outliers not associated with any of the investigated variables, which could suggest selective pressures associated with other unmeasured environmental variables and/or demographic factors. These patterns are further supported by the examination of spatial distributions of the SNPs associated with universally important traits, which typically show marked differences in allele frequencies among population clusters. Accordingly, parallel selection for features important to all wolves may eclipse local environmental selection and implies long-term separation among population clusters.

Indexed as

CanineHD BeadChip microarrayCanis lupusenvironmental selectiongenome‐wide association studysingle nucleotide polymorphismwolf

Identifiers

PMID26664688
PMCPMC4667828
OpenAlexW1917274379

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.