Evidence map›Paper›PMID 26664594›Full record

ArticleBeilstein journal of organic chemistry2015

Engineering Pichia pastoris for improved NADH regeneration: A novel chassis strain for whole-cell catalysis.

Martina Geier, Christoph Brandner, Gernot A Strohmeier, Mélanie Hall, Franz S Hartner, Anton Glieder

Open access · diamondAbstract read
In one paragraph

Article in Beilstein journal of organic chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  6. Article
  7. Review
  8. Article
  9. Carbon metabolism influenced for promoters and temperature used in the heterologous protein production using Pichia pastoris yeast.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2018
    Review
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Martina GeierAustrian Centre of Industrial Biotechnology (ACIB GmbH), Petersgasse 14, Graz, 8010, Austria.
Christoph BrandnerAustrian Centre of Industrial Biotechnology (ACIB GmbH), Petersgasse 14, Graz, 8010, Austria.
Gernot A StrohmeierAustrian Centre of Industrial Biotechnology (ACIB GmbH), Petersgasse 14, Graz, 8010, Austria ; Institute of Organic Chemistry, Graz University of Technology, Stremayrgasse 9, Graz, 8010, Austria.
Mélanie HallDepartment of Chemistry, University of Graz, Heinrichstrasse 28, Graz, 8010, Austria.
Franz S HartnerSandoz GmbH, Biochemiestrasse 10, 6250, Kundl, Austria ; Institute of Molecular Biotechnology, Graz University of Technology, Petersgasse 14, Graz, 8010, Austria.
Anton GliederInstitute of Molecular Biotechnology, Graz University of Technology, Petersgasse 14, Graz, 8010, Austria.
Austrian Centre of Industrial Biotechnology (Austria) · ATGraz University of Technology · ATInstitute of Molecular Biotechnology · ATUniversity of Graz · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many synthetically useful reactions are catalyzed by cofactor-dependent enzymes. As cofactors represent a major cost factor, methods for efficient cofactor regeneration are required especially for large-scale synthetic applications. In order to generate a novel and efficient host chassis for bioreductions, we engineered the methanol utilization pathway of Pichia pastoris for improved NADH regeneration. By deleting the genes coding for dihydroxyacetone synthase isoform 1 and 2 (DAS1 and DAS2), NADH regeneration via methanol oxidation (dissimilation) was increased significantly. The resulting Δdas1 Δdas2 strain performed better in butanediol dehydrogenase (BDH1) based whole-cell conversions. While the BDH1 catalyzed acetoin reduction stopped after 2 h reaching ~50% substrate conversion when performed in the wild type strain, full conversion after 6 h was obtained by employing the knock-out strain. These results suggest that the P. pastoris Δdas1 Δdas2 strain is capable of supplying the actual biocatalyst with the cofactor over a longer reaction period without the over-expression of an additional cofactor regeneration system. Thus, focusing the intrinsic carbon flux of this methylotrophic yeast on methanol oxidation to CO2 represents an efficient and easy-to-use strategy for NADH-dependent whole-cell conversions. At the same time methanol serves as co-solvent, inductor for catalyst and cofactor regeneration pathway expression and source of energy.

Indexed as

bioreductioncofactor regenerationdihydroxyacetone synthasemethanol utilization pathwaywhole-cell biotransformation

Identifiers

PMID26664594
PMCPMC4660914
OpenAlexW2154961357

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.