Evidence map›Paper›PMID 26663082›Full record

ArticleThe Journal of biological chemistry2016

The EF-hand Ca2+ Binding Domain Is Not Required for Cytosolic Ca2+ Activation of the Cardiac Ryanodine Receptor.

Wenting Guo, Bo Sun, Zhichao Xiao, Yingjie Liu, Yundi Wang, Lin Zhang, Ruiwu Wang, S R Wayne Chen

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Functional determination of calcium-binding sites required for the activation of inositol 1,4,5-trisphosphate receptors.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Review
  6. Article
  7. Disrupting polycystin-2 EF hand CaJournal of cell science · 2020
    Article
  8. Article
  9. Article
  10. Structure and Function of IPCold Spring Harbor perspectives in biology · 2019
    Review
  11. Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. CaTrends in biochemical sciences · 2017
    Review
  17. Intracellular CaMolecular cell · 2017
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Wenting GuoFrom the Libin Cardiovascular Institute of Alberta, Departments of Physiology and Pharmacology and Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta T2N 4N1, Canada.
Bo SunFrom the Libin Cardiovascular Institute of Alberta, Departments of Physiology and Pharmacology and Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta T2N 4N1, Canada.
Zhichao XiaoFrom the Libin Cardiovascular Institute of Alberta, Departments of Physiology and Pharmacology and Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta T2N 4N1, Canada.
Yingjie LiuFrom the Libin Cardiovascular Institute of Alberta, Departments of Physiology and Pharmacology and Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta T2N 4N1, Canada.
Yundi WangFrom the Libin Cardiovascular Institute of Alberta, Departments of Physiology and Pharmacology and Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta T2N 4N1, Canada.
Lin ZhangFrom the Libin Cardiovascular Institute of Alberta, Departments of Physiology and Pharmacology and Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta T2N 4N1, Canada.
Ruiwu WangFrom the Libin Cardiovascular Institute of Alberta, Departments of Physiology and Pharmacology and Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta T2N 4N1, Canada.
S R Wayne ChenFrom the Libin Cardiovascular Institute of Alberta, Departments of Physiology and Pharmacology and Biochemistry and Molecular Biology, University of Calgary, Calgary, Alberta T2N 4N1, Canada swchen@ucalgary.ca.
University of Calgary · CALibin Cardiovascular Institute of Alberta · CA

Funding

Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
Canadian Institutes of Health ResearchNIGMS NIH HHS P41 GM103311NIGMS NIH HHS P41-GM103311
6 · The paper itself

Abstract

Activation of the cardiac ryanodine receptor (RyR2) by elevating cytosolic Ca(2+) is a central step in the process of Ca(2+)-induced Ca(2+) release, but the molecular basis of RyR2 activation by cytosolic Ca(2+) is poorly defined. It has been proposed recently that the putative Ca(2+) binding domain encompassing a pair of EF-hand motifs (EF1 and EF2) in the skeletal muscle ryanodine receptor (RyR1) functions as a Ca(2+) sensor that regulates the gating of RyR1. Although the role of the EF-hand domain in RyR1 function has been studied extensively, little is known about the functional significance of the corresponding EF-hand domain in RyR2. Here we investigate the effect of mutations in the EF-hand motifs on the Ca(2+) activation of RyR2. We found that mutations in the EF-hand motifs or deletion of the entire EF-hand domain did not affect the Ca(2+)-dependent activation of [(3)H]ryanodine binding or the cytosolic Ca(2+) activation of RyR2. On the other hand, deletion of the EF-hand domain markedly suppressed the luminal Ca(2+) activation of RyR2 and spontaneous Ca(2+) release in HEK293 cells during store Ca(2+) overload or store overload-induced Ca(2+) release (SOICR). Furthermore, mutations in the EF2 motif, but not EF1 motif, of RyR2 raised the threshold for SOICR termination, whereas deletion of the EF-hand domain of RyR2 increased both the activation and termination thresholds for SOICR. These results indicate that, although the EF-hand domain is not required for RyR2 activation by cytosolic Ca(2+), it plays an important role in luminal Ca(2+) activation and SOICR.

Indexed as

CalciumCentrifugation, Density GradientCytosolEF Hand MotifsGene DeletionHEK293 CellsHumansMutationProtein BindingProtein Structure, SecondaryProtein Structure, TertiaryRyanodine Receptor Calcium Release ChannelCalciumRyanodine Receptor Calcium Release Channelcalciumcalcium channelcalcium imagingcalcium intracellular releasecalcium transportendoplasmic reticulum (ER)excitation-contraction coupling (E-C coupling)ryanodine receptorsarcoplasmic reticulumsite-directed mutagenesis

Identifiers

PMID26663082
PMCPMC4732201
OpenAlexW2194464187

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.