Evidence map›Paper›PMID 26662602›Full record

ArticlePlant physiology2016

Identification of a Stelar-Localized Transport Protein That Facilitates Root-to-Shoot Transfer of Chloride in Arabidopsis.

Bo Li, Caitlin Byrt, Jiaen Qiu, Ute Baumann, Maria Hrmova, Aurelie Evrard, Alexander A T Johnson, Kenneth D Birnbaum, Gwenda M Mayo, Deepa Jha and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
14.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 126 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Root-specific expression ofHorticulture research · 2025
    Article
  8. Review
  9. Chloride transport and homeostasis in plants.Quantitative plant biology · 2025
    Review
  10. Article
  11. Review
  12. MaizeInternational journal of molecular sciences · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Identification and Expression Analysis of theInternational journal of molecular sciences · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 4 countries.

Bo LiAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).
Caitlin ByrtAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).ORCID http://orcid.org/0000-0001-8549-2873
Jiaen QiuAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).ORCID http://orcid.org/0000-0001-9220-4219
Ute BaumannAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).
Maria HrmovaAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).
Aurelie EvrardAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).
Alexander A T JohnsonAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).
Kenneth D BirnbaumAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).
Gwenda M MayoAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).
Deepa JhaAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).
Sam W HendersonAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).ORCID http://orcid.org/0000-0003-3019-1891
Mark TesterAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.) mark.tester@kaust.edu.sa matthew.gilliham@adelaide.edu.au.ORCID http://orcid.org/0000-0002-5085-8801
Mathew GillihamAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.) mark.tester@kaust.edu.sa matthew.gilliham@adelaide.edu.au.ORCID http://orcid.org/0000-0003-0666-3078
Stuart J RoyAustralian Centre for Plant Functional Genomics (B.L., J.Q., U.B., M.H., A.E., D.J., M.T., S.J.R.), School of Agriculture, Food, and Wine (B.L., C.B., J.Q., U.B., M.H., A.E., G.M.M., D.J., S.W.H., M.T., M.G., S.J.R.), and ARC Centre of Excellence in Plant Energy Biology (C.B., J.Q., S.W.H., M.G.), University of Adelaide, SA 5064, Australia;Centre for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia (B.L., M.T.);School of BioSciences, University of Melbourne, Parkville, Vic 3010, Australia (A.A.T.J.); and Centre for Genomics and Systems Biology, New York University, New York 10003 (K.D.B.).ORCID http://orcid.org/0000-0003-0411-9431
Australian Centre for Plant Functional Genomics · AUNew York University · USThe University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Under saline conditions, higher plants restrict the accumulation of chloride ions (Cl(-)) in the shoot by regulating their transfer from the root symplast into the xylem-associated apoplast. To identify molecular mechanisms underpinning this phenomenon, we undertook a transcriptional screen of salt stressed Arabidopsis (Arabidopsis thaliana) roots. Microarrays, quantitative RT-PCR, and promoter-GUS fusions identified a candidate gene involved in Cl(-) xylem loading from the Nitrate transporter 1/Peptide Transporter family (NPF2.4). This gene was highly expressed in the root stele compared to the cortex, and its expression decreased after exposure to NaCl or abscisic acid. NPF2.4 fused to fluorescent proteins, expressed either transiently or stably, was targeted to the plasma membrane. Electrophysiological analysis of NPF2.4 in Xenopus laevis oocytes suggested that NPF2.4 catalyzed passive Cl(-) efflux out of cells and was much less permeable to NO3(-). Shoot Cl(-) accumulation was decreased following NPF2.4 artificial microRNA knockdown, whereas it was increased by overexpression of NPF2.4. Taken together, these results suggest that NPF2.4 is involved in long-distance transport of Cl(-) in plants, playing a role in the loading and the regulation of Cl(-) loading into the xylem of Arabidopsis roots during salinity stress.

Indexed as

Abscisic AcidAnimalsArabidopsisArabidopsis ProteinsBiological TransportCell MembraneChloridesComputational BiologyDown-RegulationGene Expression Regulation, PlantGene Knockdown TechniquesGenes, PlantGenetic Association StudiesGlucuronidaseMembrane Transport ProteinsOocytesAbscisic AcidArabidopsis ProteinsChloridesGlucuronidaseMembrane Transport ProteinsSodium Chloride

Identifiers

PMID26662602
PMCPMC4734554
OpenAlexW2193753850

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.