Evidence map›Paper›PMID 26661839›Full record

ArticleThe Journal of nutrition2016

Genetics, Diet, and Season Are Associated with Serum 25-Hydroxycholecalciferol Concentration in a Yup'ik Study Population from Southwestern Alaska.

Alison E Fohner, Zhican Wang, Joseph Yracheta, Diane M O'Brien, Scarlett E Hopkins, Jynene Black, Jacques Philip, Howard W Wiener, Hemant K Tiwari, Patricia L Stapleton and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of nutrition, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 4 pooled it
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 4 syntheses or guidelines pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Association Between Vitamin D and Uric Acid in Adults: A Systematic Review and Meta-Analysis.Hormone and metabolic research = Hormon- und Stoffwechselforschung = Hormones et metabolisme · 2020
    Pooled it
  4. Pooled it
  5. Trial
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  10. Observational
  11. Article
  12. Article
  13. Negative Impact of 25-hydroxyvitamin D Deficiency on Breast Cancer Survival.Asian Pacific journal of cancer prevention : APJCP · 2019
    Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Alison E FohnerDepartments of Pharmaceutics.
Zhican WangDepartments of Pharmaceutics.
Joseph YrachetaDepartments of Pharmaceutics.
Diane M O'BrienCenter for Alaska Native Health Research, University of Alaska Fairbanks, Fairbanks, AK; and.
Scarlett E HopkinsCenter for Alaska Native Health Research, University of Alaska Fairbanks, Fairbanks, AK; and.
Jynene BlackCenter for Alaska Native Health Research, University of Alaska Fairbanks, Fairbanks, AK; and.
Jacques PhilipCenter for Alaska Native Health Research, University of Alaska Fairbanks, Fairbanks, AK; and.
Howard W WienerSchool of Public Health, University of Alabama at Birmingham, Birmingham, AL.
Hemant K TiwariSchool of Public Health, University of Alabama at Birmingham, Birmingham, AL.
Patricia L StapletonEnvironmental Health Sciences, and.
Jesse M TsaiEnvironmental Health Sciences, and.
Timothy A ThorntonBiostatistics, University of Washington, Seattle, WA;
Bert B BoyerCenter for Alaska Native Health Research, University of Alaska Fairbanks, Fairbanks, AK; and.
Kenneth E ThummelDepartments of Pharmaceutics, thummel@u.washington.edu.
University of Washington · USUniversity of Alaska Fairbanks · USUniversity of Alabama at Birmingham · US

Funding

XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI ALI SHOJAIE · 1995 to 2026
$42.5M
YUP'IK PERCEPTIONS OF BODY WEIGHT AND DIABETESP20RR016430 · NCRR · UNIVERSITY OF ALASKA FAIRBANKS · PI BERSAMIN, ANDREA · 2001 to 2011
$23.4M
Pharmacogenomics and Risk of Cardiovascular DiseaseU19HL069757 · NHLBI · CHILDREN'S HOSPITAL & RES CTR AT OAKLAND · PI KRAUSS, RONALD M · 2010 to 2014
$12.8M
Pharmacogenetics in Rural and Underserved PopulationsU01GM092676 · NIGMS · UNIVERSITY OF WASHINGTON · PI BURKE, WYLIE G., THUMMEL, KENNETH E. · 2010 to 2014
$9.9M
Statistical Methods for X-Chromosome Genetic DataP01GM099568 · NIGMS · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2012 to 2016
$7.3M
Hormonal Regulation of Human CYP3AR01GM063666 · NIGMS · UNIVERSITY OF WASHINGTON · PI THUMMEL, KENNETH E. · 2002 to 2017
$5.3M
Pilot Project ProgramP30GM103325 · NIGMS · UNIVERSITY OF ALASKA FAIRBANKS · PI BERSAMIN, ANDREA · 2012 to 2016
$5.3M
Genetics of Obesity in Yup'ik EskimosR01DK074842 · NIDDK · UNIVERSITY OF ALASKA FAIRBANKS · PI BOYER, BERT BRANDON · 2007 to 2011
$2.8M
New Vistas in Vitamin K MetabolismR01GM109743 · NIGMS · UNIVERSITY OF WASHINGTON · PI RETTIE, ALLAN EDWARD · 2013 to 2016
$1.1M
Statistical Methods for Cancer Genetic Association Studies with Hidden PopulationK01CA148958 · NCI · UNIVERSITY OF WASHINGTON · PI THORNTON, TIMOTHY ALVIN · 2010 to 2014
$682k
NCI NIH HHS K01 CA148958NCRR NIH HHS P20 RR16430NHLBI NIH HHS U19 HL069757NIDDK NIH HHS R01 DK074842NIEHS NIH HHS P30 ES007033NIGMS NIH HHS GM109743NIGMS NIH HHS P01 GM099568NIGMS NIH HHS P30 GM103325NIGMS NIH HHS R01 GM 063666NIGMS NIH HHS R01 GM063666NIGMS NIH HHS U01 GM092676
6 · The paper itself

Abstract

backgroundLow blood vitamin D concentration is a concern for people living in circumpolar regions, where sunlight is insufficient for vitamin D synthesis in winter months and the consumption of traditional dietary sources of vitamin D is decreasing.

objectiveThe objective was to characterize the effects of diet, genetic variation, and season on serum 25-hydroxycholecalciferol [25(OH)D3] concentrations in Yup'ik Alaska Native people living in rural southwest Alaska.

methodsThis study was a cross-sectional design that assessed the associations of traditional diet (via a biomarker, the RBC δ(15)N value), age, gender, body mass index (BMI), community location, and genotype of select single nucleotide polymorphisms (SNPs) in cytochrome P450 family 2, subfamily R, peptide 1 (CYP2R1), 7-dehydrocholesterol reductase (DHCR7), and vitamin D binding protein (GC) with serum 25(OH)D3 concentrations in 743 Yup'ik male and female participants, aged 14-93 y, recruited between September 2009 and December 2013.

resultsYup'ik participants, on average, had adequate concentrations of serum 25(OH)D3 (31.1 ± 1.0 ng/mL). Variations in diet, BMI, age, gender, season of sample collection, and inland or coastal community geography were all significantly associated with serum 25(OH)D3 concentration. In models not adjusting for other covariates, age, diet, and seasonal effects explained 33.7%, 20.7%, and 9.8%, respectively, of variability in serum 25(OH)D3 concentrations. Of the 8 SNPs interrogated in CYP2R1 and DHCR7, only rs11023374 in CYP2R1 was significantly associated with serum 25(OH)D3, explaining 1.5% of variability. The GC haplotype explained an additional 2.8% of variability. Together, age, diet, gender, season of sample collection, BMI, geography of the community, and genotype at rs11023374 explained 52.5% of the variability in serum 25(OH)D3 concentrations.

conclusionsLower consumption of the traditional diet was associated with lower serum concentrations of 25(OH)D3. Younger adults and youth in this community may be at increased risk of adverse outcomes associated with vitamin D insufficiency compared with older members of the community, especially during seasons of low sunlight exposure, because of lower consumption of dietary sources of vitamin D.

Indexed as

DietIndians, North AmericanPolymorphism, Single NucleotideSeasonsAdolescentAdultAlaskaCalcifediolCholestanetriol 26-MonooxygenaseCross-Sectional StudiesCytochrome P450 Family 2ErythrocytesFeeding BehaviorFemaleHumansMaleCalcifediolCholestanetriol 26-MonooxygenaseCYP2R1 protein, humanCytochrome P450 Family 2Vitamin D-Binding ProteinAlaska NativeAmerican Indiancholecalciferolpolyunsaturated fatty acidpublic healthvitamin D

Identifiers

PMID26661839
PMCPMC4725435
OpenAlexW2196158729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.