Evidence map›Paper›PMID 26660479›Full record

ArticleJournal of industrial microbiology & biotechnology2016

Improvement of lactic acid production in Saccharomyces cerevisiae by a deletion of ssb1.

Jinsuk J Lee, Nathan Crook, Jie Sun, Hal S Alper

Abstract read
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In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Increased CONature communications · 2024
    Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Advances in RNAi-Assisted Strain Engineering inFrontiers in bioengineering and biotechnology · 2020
    Review
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Jinsuk J LeeBiomaterials Lab, Samsung Advanced Institute of Technology, 130 Samsung-ro, Yeongtong-gu, Suwon-si, Gyeonggi-do, South Korea.
Nathan CrookMcKetta Department of Chemical Engineering, The University of Texas at Austin, 200 East Dean Keeton Street Stop C0400, Austin, TX, 78712, USA.
Jie SunMcKetta Department of Chemical Engineering, The University of Texas at Austin, 200 East Dean Keeton Street Stop C0400, Austin, TX, 78712, USA.
Hal S AlperMcKetta Department of Chemical Engineering, The University of Texas at Austin, 200 East Dean Keeton Street Stop C0400, Austin, TX, 78712, USA. halper@che.utexas.edu.
The University of Texas at Austin · USSamsung (South Korea) · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polylactic acid (PLA) is an important renewable polymer, but current processes for producing its precursor, lactic acid, suffer from process inefficiencies related to the use of bacterial hosts. Therefore, improving the capacity of Saccharomyces cerevisiae to produce lactic acid is a promising approach to improve industrial production of lactic acid. As one such improvement required, the lactic acid tolerance of yeast must be significantly increased. To enable improved tolerance, we employed an RNAi-mediated genome-wide expression knockdown approach as a means to rapidly identify potential genetic targets. In this approach, several gene knockdown targets were identified which confer increased acid tolerance to S. cerevisiae BY4741, of which knockdown of the ribosome-associated chaperone SSB1 conferred the highest increase (52%). This target was then transferred into a lactic acid-overproducing strain of S. cerevisiae CEN.PK in the form of a knockout and the resulting strain demonstrated up to 33% increased cell growth, 58% increased glucose consumption, and 60% increased L-lactic acid production. As SSB1 contains a close functional homolog SSB2 in yeast, this result was counterintuitive and may point to as-yet-undefined functional differences between SSB1 and SSB2 related to lactic acid production. The final strain produced over 50 g/L of lactic acid in under 60 h of fermentation.

Indexed as

Metabolic EngineeringFermentationGene Knockdown TechniquesHSP70 Heat-Shock ProteinsLactic AcidPolyestersPolymersRNA InterferenceSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsHSP70 Heat-Shock ProteinsLactic AcidPolyesterspoly(lactide)PolymersSaccharomyces cerevisiae ProteinsSSB1 protein, S cerevisiaeAcid toleranceGenome-wide knockdown libraryLactic acidRNA interferenceSSB1Yeast

Identifiers

PMID26660479
OpenAlexW2473378339

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.