Evidence map›Paper›PMID 26660354›Full record

ArticleThe Prostate2016

Spectrum of mitochondrial genomic variation and associated clinical presentation of prostate cancer in South African men.

John P McCrow, Desiree C Petersen, Melanie Louw, Eva K F Chan, Katherine Harmeyer, Stefano Vecchiarelli, Ruth J Lyons, M S Riana Bornman, Vanessa M Hayes

Open access · hybridAbstract read
In one paragraph

Article in The Prostate, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 34 citations in OpenAlex.

  1. Changes inBiomedicines · 2024
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  11. The Role of Mitochondria in Carcinogenesis.International journal of molecular sciences · 2021
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  17. CytochromeCancer research · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

John P McCrowJ. Craig Venter Institute, La Jolla, California.
Desiree C PetersenJ. Craig Venter Institute, La Jolla, California.
Melanie LouwDepartment of Pathology, University of Pretoria, South Africa.
Eva K F ChanLaboratory for Human Comparative and Prostate Cancer Genomics, Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, Australia.
Katherine HarmeyerJ. Craig Venter Institute, La Jolla, California.
Stefano VecchiarelliLaboratory for Human Comparative and Prostate Cancer Genomics, Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, Australia.
Ruth J LyonsLaboratory for Human Comparative and Prostate Cancer Genomics, Garvan Institute of Medical Research, Darlinghurst, Sydney, NSW, Australia.
M S Riana BornmanSchool of Health Systems and Public Health, University of Pretoria, South Africa.
Vanessa M HayesJ. Craig Venter Institute, La Jolla, California.
Garvan Institute of Medical Research · AUUniversity of Pretoria · ZAJ. Craig Venter Institute · USUNSW Sydney · AU

Funding

Impact of Mitochondrial Genome Variation on extreme Prostate Cancer DisparitiesR21CA170081 · NCI · J. CRAIG VENTER INSTITUTE, INC. · PI ADAMS, MARK D · 2012 to 2013
$411k
NCI NIH HHS R21-CA170081
6 · The paper itself

Abstract

backgroundProstate cancer incidence and mortality rates are significantly increased in African-American men, but limited studies have been performed within Sub-Saharan African populations. As mitochondria control energy metabolism and apoptosis we speculate that somatic mutations within mitochondrial genomes are candidate drivers of aggressive prostate carcinogenesis.

methodsWe used matched blood and prostate tissue samples from 87 South African men (77 with African ancestry) to perform deep sequencing of complete mitochondrial genomes. Clinical presentation was biased toward aggressive disease (Gleason score >7, 64%), and compared with men without prostate cancer either with or without benign prostatic hyperplasia.

resultsWe identified 144 somatic mtDNA single nucleotide variants (SNVs), of which 80 were observed in 39 men presenting with aggressive disease. Both the number and frequency of somatic mtDNA SNVs were associated with higher pathological stage.

conclusionsBesides doubling the total number of somatic PCa-associated mitochondrial genome mutations identified to date, we associate mutational load with aggressive prostate cancer status in men of African ancestry.

Indexed as

AgedAged, 80 and overBlack or African AmericanBlack PeopleDNA, MitochondrialGenetic Predisposition to DiseaseGenetic VariationGenome, MitochondrialGenotypeHumansKallikreinsMaleMiddle AgedMutationNeoplasm GradingPolymorphism, Single NucleotideDNA, MitochondrialKallikreinsKLK3 protein, humanProstate-Specific AntigenAfrican ancestrymitochondriaoutcomesprostate cancervariation

Identifiers

PMID26660354
PMCPMC4832339
OpenAlexW2191648712

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.