Evidence map›Paper›PMID 26660103›Full record

ArticleJournal of medical genetics2016

The regulatory element READ1 epistatically influences reading and language, with both deleterious and protective alleles.

Natalie R Powers, John D Eicher, Laura L Miller, Yong Kong, Shelley D Smith, Bruce F Pennington, Erik G Willcutt, Richard K Olson, Susan M Ring, Jeffrey R Gruen

Open access · hybridAbstract read
In one paragraph

Article in Journal of medical genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Dyslexia associated geneFrontiers in cell and developmental biology · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Proceedings. Biological sciences · 2020
    Article
  11. Effect of READ1 on latent profiles of reading disorder and comorbid attention and language impairment subtypes.Child neuropsychology : a journal on normal and abnormal development in childhood and adolescence · 2020
    Article
  12. Worldwide distribution of theProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Study of Genetic Association WithClinical practice and epidemiology in mental health : CP & EMH · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Natalie R PowersInvestigate Medicine, Yale University, New Haven, Connecticut, USA Department of Pediatrics, Yale University, New Haven, Connecticut, USA.
John D EicherInvestigate Medicine, Yale University, New Haven, Connecticut, USA.
Laura L MillerSchool of Social and Community Medicine, University of Bristol, Bristol, UK.
Yong KongDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA W.M. Keck Foundation Biotechnology Resource Laboratory, Yale University, New Haven, Connecticut, USA.
Shelley D SmithDepartments of Pediatrics and Developmental Neuroscience, University of Nebraska Medical Center, Omaha, Nebraska, USA.
Bruce F PenningtonDepartment of Psychology, University of Denver, Denver, Colorado, USA.
Erik G WillcuttInstitute for Behavioral Genetics, University of Colorado, Boulder, Colorado, USA Departments of Psychology and Neuroscience, University of Colorado, Boulder, Colorado, USA.
Richard K OlsonInstitute for Behavioral Genetics, University of Colorado, Boulder, Colorado, USA Departments of Psychology and Neuroscience, University of Colorado, Boulder, Colorado, USA.
Susan M RingSchool of Social and Community Medicine, University of Bristol, Bristol, UK MRC Integrative Epidemiology Unit, University of Bristol, Bristol, UK.
Jeffrey R GruenInvestigate Medicine, Yale University, New Haven, Connecticut, USA Department of Pediatrics, Yale University, New Haven, Connecticut, USA Department of Investigative Medicine, Yale University, New Haven, Connecticut, USA.
Yale University · USUniversity of Colorado Boulder · USMRC Epidemiology Unit · GBUniversity of Bristol · GBUniversity of Denver · USUniversity of Nebraska Medical Center · US

Funding

Yale Pathology Tissue Services Shared ResourceP30CA016359 · NCI · YALE UNIVERSITY · PI MEGAN C KING · 1985 to 2026
$85.0M
VALIDITY OF SUBTYPES OF ADHDP50HD027802 · NICHD · UNIVERSITY OF COLORADO AT BOULDER · PI ERIK G WILLCUTT · 1990 to 2026
$44.9M
Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
Discovery of the 6p21.3 Reading Disability GeneR01NS043530 · NINDS · YALE UNIVERSITY · PI GRUEN, JEFFREY R · 2003 to 2010
$4.3M
Pleiotropic Roles of Dyslexia Genes in Neurodevelopmental Language ImpairmentsF31DC012270 · NIDCD · YALE UNIVERSITY · PI EICHER, JOHN · 2011 to 2013
$121k
Medical Research Council G9815508Medical Research Council MC_PC_15018NCI NIH HHS P30 CA016359NICHD NIH HHS P50 HD027802NIDCD NIH HHS F31 DC012270NIGMS NIH HHS T32 GM007223NINDS NIH HHS R01 NS043530Wellcome Trust 092731Wellcome Trust 102215
6 · The paper itself

Abstract

backgroundReading disability (RD) and language impairment (LI) are heritable learning disabilities that obstruct acquisition and use of written and spoken language, respectively. We previously reported that two risk haplotypes, each in strong linkage disequilibrium (LD) with an allele of READ1, a polymorphic compound short tandem repeat within intron 2 of risk gene DCDC2, are associated with RD and LI. Additionally, we showed a non-additive genetic interaction between READ1 and KIAHap, a previously reported risk haplotype in risk gene KIAA0319, and that READ1 binds the transcriptional regulator ETV6.

objectiveTo examine the hypothesis that READ1 is a transcriptional regulator of KIAA0319.

methodsWe characterised associations between READ1 alleles and RD and LI in a large European cohort, and also assessed interactions between READ1 and KIAHap and their effect on performance on measures of reading, language and IQ. We also used family-based data to characterise the genetic interaction, and chromatin conformation capture (3C) to investigate the possibility of a physical interaction between READ1 and KIAHap. RESULTS AND

conclusionsREAD1 and KIAHap show interdependence--READ1 risk alleles synergise with KIAHap, whereas READ1 protective alleles act epistatically to negate the effects of KIAHap. The family data suggest that these variants interact in trans genetically, while the 3C results show that a region of DCDC2 containing READ1 interacts physically with the region upstream of KIAA0319. These data support a model in which READ1 regulates KIAA0319 expression through KIAHap and in which the additive effects of READ1 and KIAHap alleles are responsible for the trans genetic interaction.

Indexed as

AllelesEpistasis, GeneticFemaleHumansInfantInfant, NewbornIntronsLanguage DisordersLearning DisabilitiesMicrotubule-Associated ProteinsNerve Tissue ProteinsPregnancyRegulatory Sequences, Nucleic AcidTandem Repeat SequencesDCDC2 protein, humanKIAA0319 protein, humanMicrotubule-Associated ProteinsNerve Tissue ProteinsComplex traitsdyslexialanguage impairmentREAD1reading disability

Identifiers

PMID26660103
PMCPMC4789805
OpenAlexW2203816926

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.