ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2016
Genome-wide association study reveals the genetic architecture of flowering time in rapeseed (Brassica napus L.).
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers, 1 of them a synthesis that pooled it.
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Who cites it
100 citing papers in PubMed, 1 synthesis or guideline pooled it, 143 citations in OpenAlex.
- Discovery of common loci and candidate genes for controlling salt-alkali tolerance and yield-related traits in Brassica napus L.Plant cell reports · 2023Pooled it
- Genome-wide cyclin gene evolution in Arabidopsis and Brassica reveals polyploidization-driven duplication and flowering-time associations.Molecular genetics and genomics : MGG · 2026Article
- Identification of Candidate Heat-Tolerance Genes in Maize by Integrating Linkage and Transcriptomic Analyses.Plants (Basel, Switzerland) · 2026Article
- ddRAD-seq data reveals the significant population structure and potential causes of population divergence in Bougainvillea.Scientific reports · 2025Article
- Optimization and application of genome prediction model in rapeseed: flowering time, yield components, and oil content as examples.Horticulture research · 2025Article
- Unlocking genetic potential: a review of the role of CRISPR/Cas technologies in rapeseed improvement.Stress biology · 2025Review
- Genome-wide association study reveals genetic loci for seed density per silique in rapeseed (Brassica napus L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Elucidation of the genetic basis of variation in flowering time in Brassica napus via genome-wide association studies and gene coexpression analysis.BMC plant biology · 2025Article
- Genetic dissection of flowering time and fine mapping of qFT.A02-1 in rapeseed (Brassica napus L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Transgressive expression and dosage effect of A09 chromosome genes and their homoeologous genes influence the flowering time of resynthesized allopolyploid Brassica napus.BMC plant biology · 2025Article
- A novel strategy to map a locus associated with flowering time in canola (Brassica napus L.).Molecular genetics and genomics : MGG · 2024Article
- Genome-Wide Identification of B-Box Family Genes and Their Potential Roles in Seed Development under Shading Conditions in Rapeseed.Plants (Basel, Switzerland) · 2024Article
- The story of a decade: Genomics, functional genomics, and molecular breeding in Brassica napus.Plant communications · 2024Review
- Identification of Genomic Regions for Traits Associated with Flowering in Cassava (Plants (Basel, Switzerland) · 2024Article
- Genome-wide association study ofFrontiers in plant science · 2024Article
- Dissection of quantitative trait nucleotides and candidate genes associated with agronomic and yield-related traits under drought stress in rapeseed varieties: integration of genome-wide association study and transcriptomic analysis.Frontiers in plant science · 2024Article
- Phenomic Selection for Hybrid Rapeseed Breeding.Plant phenomics (Washington, D.C.) · 2024Article
- Integrating genome-wide association study with transcriptomic data to predict candidate genes influencing Brassica napus root and biomass-related traits under low phosphorus conditions.Biotechnology for biofuels and bioproducts · 2023Article
- Genome-wide association study of 23 flowering phenology traits and 4 floral agronomic traits in tree peony (Horticulture research · 2023Article
- Integration of genome-wide association studies, metabolomics, and transcriptomics reveals phenolic acid- and flavonoid-associated genes and their regulatory elements under drought stress in rapeseed flowers.Frontiers in plant science · 2023Article
40 more citing papers are in PubMed but not listed here.
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Authors and funding
13 authors at 5 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Flowering time adaptation is a major breeding goal in the allopolyploid species Brassica napus. To investigate the genetic architecture of flowering time, a genome-wide association study (GWAS) of flowering time was conducted with a diversity panel comprising 523 B. napus cultivars and inbred lines grown in eight different environments. Genotyping was performed with a Brassica 60K Illumina Infinium SNP array. A total of 41 single-nucleotide polymorphisms (SNPs) distributed on 14 chromosomes were found to be associated with flowering time, and 12 SNPs located in the confidence intervals of quantitative trait loci (QTL) identified in previous researches based on linkage analyses. Twenty-five candidate genes were orthologous to Arabidopsis thaliana flowering genes. To further our understanding of the genetic factors influencing flowering time in different environments, GWAS was performed on two derived traits, environment sensitivity and temperature sensitivity. The most significant SNPs were found near Bn-scaff_16362_1-p380982, just 13 kb away from BnaC09g41990D, which is orthologous to A. thaliana CONSTANS (CO), an important gene in the photoperiod flowering pathway. These results provide new insights into the genetic control of flowering time in B. napus and indicate that GWAS is an effective method by which to reveal natural variations of complex traits in B. napus.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.