Evidence map›Paper›PMID 26658659›Full record

ArticlePloS one2015

Variants of the Coagulation and Inflammation Genes Are Replicably Associated with Myocardial Infarction and Epistatically Interact in Russians.

Rosa M Barsova, Dmitrijs Lvovs, Boris V Titov, Natalia A Matveeva, Roman M Shakhnovich, Tatiana S Sukhinina, Nino G Kukava, Mikhail Ya Ruda, Irina M Karamova, Timur R Nasibullin and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Rosa M BarsovaInstitute of Experimental Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Dmitrijs LvovsDepartment of Computational Biology, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.
Boris V TitovInstitute of Experimental Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Natalia A MatveevaInstitute of Experimental Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Roman M ShakhnovichDepartment of Emergency Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Tatiana S SukhininaDepartment of Emergency Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Nino G KukavaDepartment of Emergency Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Mikhail Ya RudaDepartment of Emergency Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Irina M KaramovaDivision of Cardiology, Republican Cardiology Health Center, Ufa, the Republic of Bashkortostan, Russia.
Timur R NasibullinDepartment of Genomics, Institute of Biochemistry and Genetics, Ufa Research Center, Russian Academy of Sciences, Ufa, Russia.
Olga E MustafinaDepartment of Genomics, Institute of Biochemistry and Genetics, Ufa Research Center, Russian Academy of Sciences, Ufa, Russia.
German J OsmakDepartment of Molecular Biology and Medical Biotechnology, Pirogov Russian National Research Medical University, Moscow, Russia.
Ekaterina Yu TsarevaInstitute of Experimental Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Olga G KulakovaInstitute of Experimental Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Alexander V FavorovDepartment of Computational Biology, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.
Olga O FavorovaInstitute of Experimental Cardiology, Russian Cardiology Scientific and Production Center, Moscow, Russia.
Institute of Experimental Cardiology · RUPirogov Russian National Research Medical University · RURussian Academy of Sciences · RUVavilov Institute of General Genetics · RU

Funding

Translational Research Central ServicesP30CA006973 · NCI · JOHNS HOPKINS UNIVERSITY · PI WILLIAM George NELSON · 1985 to 2026
$208.6M
NCI NIH HHS P30 CA006973
6 · The paper itself

Abstract

backgroundIn spite of progress in cardiovascular genetics, data on genetic background of myocardial infarction are still limited and contradictory. This applies as well to the genes involved in inflammation and coagulation processes, which play a crucial role in the disease etiopathogenesis. METHODS AND

resultsIn this study we found genetic variants of TGFB1, FGB and CRP genes associated with myocardial infarction in discovery and replication groups of Russian descent from the Moscow region and the Republic of Bashkortostan (325/185 and 220/197 samples, correspondingly). We also found and replicated biallelic combinations of TGFB1 with FGB, TGFB1 with CRP and IFNG with PTGS1 genetic variants associated with myocardial infarction providing a detectable cumulative effect. We proposed an original two-component procedure for the analysis of nonlinear (epistatic) interactions between the genes in biallelic combinations and confirmed the epistasis hypothesis for the set of alleles of IFNG with PTGS. The procedure is applicable to any pair of logical variables, e.g. carriage of two sets of alleles. The composite model that included three single gene variants and the epistatic pair has AUC of 0.66 both in discovery and replication groups.

conclusionsThe genetic impact of TGFB1, FGB, CRP, IFNG, and PTGS and/or their biallelic combinations on myocardial infarction was found and replicated in Russians. Evidence of epistatic interactions between IFNG with PTGS genes was obtained both in discovery and replication groups.

Indexed as

AdultAgedAllelesBlood CoagulationC-Reactive ProteinCyclooxygenase 1FemaleFibrinogenGenetic Association StudiesGenetic MarkersGenotypeHumansInflammationInterferon-gammaLinkage DisequilibriumLogistic ModelsC-Reactive ProteinCyclooxygenase 1FGB protein, humanFibrinogenGenetic MarkersIFNG protein, humanInterferon-gammaPTGS1 protein, humanTransforming Growth Factor beta1

Identifiers

PMID26658659
PMCPMC4675542
OpenAlexW2340448965

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.