Evidence map›Paper›PMID 26658065›Full record

ArticleInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases2016

Detection and molecular characterization of sapoviruses in dogs.

Livia Bodnar, Barbara Di Martino, Federica Di Profio, Irene Melegari, Gianvito Lanave, Eleonora Lorusso, Alessandra Cavalli, Gabriella Elia, Krisztián Bányai, Fulvio Marsilio and 2 more

Open access · greenAbstract read
In one paragraph

Article in Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  4. A novel recombinant porcine sapovirus infection in piglets with diarrhea in Shandong Province, China, 2022.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
    Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Livia BodnarDepartment of Veterinary Medicine, Università degli Studi di Bari Aldo Moro, Valenzano, Italy.
Barbara Di MartinoFaculty of Veterinary Medicine, Università degli Studi di Teramo, Teramo, Italy.
Federica Di ProfioFaculty of Veterinary Medicine, Università degli Studi di Teramo, Teramo, Italy.
Irene MelegariFaculty of Veterinary Medicine, Università degli Studi di Teramo, Teramo, Italy.
Gianvito LanaveDepartment of Veterinary Medicine, Università degli Studi di Bari Aldo Moro, Valenzano, Italy.
Eleonora LorussoDepartment of Veterinary Medicine, Università degli Studi di Bari Aldo Moro, Valenzano, Italy.
Alessandra CavalliDepartment of Veterinary Medicine, Università degli Studi di Bari Aldo Moro, Valenzano, Italy.
Gabriella EliaDepartment of Veterinary Medicine, Università degli Studi di Bari Aldo Moro, Valenzano, Italy.
Krisztián BányaiInstitute for Veterinary Medical Research, Centre for Agricultural Research, Budapest, Hungary.
Fulvio MarsilioFaculty of Veterinary Medicine, Università degli Studi di Teramo, Teramo, Italy.
Canio BuonavogliaDepartment of Veterinary Medicine, Università degli Studi di Bari Aldo Moro, Valenzano, Italy; Experimental Zooprophylactic Institute of Puglia and Basilicata, Foggia, Italy.
Vito MartellaDepartment of Veterinary Medicine, Università degli Studi di Bari Aldo Moro, Valenzano, Italy. Electronic address: vito.martella@uniba.it.
University of Bari Aldo Moro · ITUniversity of Teramo · ITHUN-REN Veterinary Medical Research Institute · HUIstituto Zooprofilattico Sperimentale della Puglia e della Basilicata · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Caliciviruses are important human and animal pathogens. Novel caliciviruses have been identified recently in dogs, raising questions about their pathogenic role and concerns regarding their zoonotic potential. By screening stool samples of young or juvenile dogs using RT-PCR assays, sapoviruses (SaVs) were found in 7/320 (2.2%) samples of animals with acute gastroenteritis while they were not detected in healthy animals (0/119). The sequence of a nearly 3kb portion at the 3' end of the genome, encompassing the RNA-dependent RNA polymerase (RdRp), the capsid region (ORF1) and the ORF2 were determined for three strains. A distinctive genetic feature in canine SaVs was a 4-nucleotide (nt) interval between the ORF1 and ORF2. Two strains (Bari/4076/07/ITA and Bari/253/07/ITA) were very closely related in the RdRp and capsid regions to the strain AN210D/09/USA (90.4-93.9% nt), while strain Bari/5020/07/ITA displayed only 71.0-72.0% nt identity to this group of canine SaVs and 76.0% to strain AN196/09/USA. Overall, these findings indicate that the canine SaVs detected in Italy may represent distinct capsid types, although all currently known SaVs segregate into the novel proposed genogroup, tentatively named as GXIII.

Indexed as

AnimalsCaliciviridae InfectionsDog DiseasesDogsGastroenteritisGenotypeOpen Reading FramesPhylogenyRNA, ViralSapovirusSequence Analysis, DNARNA, ViralDogsEnteritisGenomic analysisSapovirus

Identifiers

PMID26658065
PMCPMC7106069
OpenAlexW2182054273

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.