Evidence map›Paper›PMID 26656780›Full record

ArticleEpilepsy research2016

Hlf is a genetic modifier of epilepsy caused by voltage-gated sodium channel mutations.

Nicole A Hawkins, Jennifer A Kearney

Open access · greenAbstract read
In one paragraph

Article in Epilepsy research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. DecipheringArXiv · 2024
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  6. A novelThe Journal of international medical research · 2023
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  7. Strain-dependent effects on neurobehavioral and seizure phenotypes inbioRxiv : the preprint server for biology · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Phenotypic and Genotypic Characteristics ofFrontiers in molecular neuroscience · 2022
    Article
  14. Gabra2 is a genetic modifier of Dravet syndrome in mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2021
    Article
  15. Article
  16. The K328M substitution in the human GABANeurobiology of disease · 2021
    Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Nicole A HawkinsDepartment of Pharmacology, Northwestern University, Feinberg School of Medicine, Searle 8-520, 320 East Superior St., Chicago, IL 60091, United States; Neuroscience Program, Vanderbilt University, Nashville, TN 37232, United States.
Jennifer A KearneyDepartment of Pharmacology, Northwestern University, Feinberg School of Medicine, Searle 8-520, 320 East Superior St., Chicago, IL 60091, United States; Department of Medicine, Vanderbilt University, Nashville, TN 37232, United States. Electronic address: jennifer.kearney@northwestern.edu.
Northwestern University · US

Funding

Combined Approach to the Genetic Basis of EpilepsyR01NS053792 · NINDS · VANDERBILT UNIVERSITY · PI KEARNEY, JENNIFER A · 2006 to 2019
$4.7M
Genetic Modifiers of Childhood EpilepsyR01NS084959 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KEARNEY, JENNIFER A · 2014 to 2024
$4.2M
Identification of Epilepsy Modifier Genes in a Mouse ModelF31NS077700 · NINDS · VANDERBILT UNIVERSITY · PI HAWKINS, NICOLE A · 2011 to 2013
$51k
NINDS NIH HHS F31 NS077700NINDS NIH HHS F31-NS077700NINDS NIH HHS R01 NS053792NINDS NIH HHS R01-NS053792NINDS NIH HHS R01 NS084959
6 · The paper itself

Abstract

Mutations in voltage-gated sodium channel genes cause several types of human epilepsies. Often, individuals with the same sodium channel mutation exhibit diverse phenotypes. This suggests that factors beyond the primary mutation influence disease severity, including genetic modifiers. Mouse epilepsy models with voltage-gated sodium channel mutations exhibit strain-dependent phenotype variability, supporting a contribution of genetic modifiers in epilepsy. The Scn2a(Q54) (Q54) mouse model has a strain-dependent epilepsy phenotype. Q54 mice on the C57BL/6J (B6) strain exhibit delayed seizure onset and improved survival compared to [B6xSJL/J]F1.Q54 mice. We previously mapped two dominant modifier loci that influence Q54 seizure susceptibility and identified Hlf (hepatic leukemia factor) as a candidate modifier gene at one locus. Hlf and other PAR bZIP transcription factors had previously been associated with spontaneous seizures in mice thought to be caused by down-regulation of the pyridoxine pathway. An Hlf targeted knockout mouse model was used to evaluate the effect of Hlf deletion on Q54 phenotype severity. Hlf(KO/KO);Q54 double mutant mice exhibited elevated frequency and reduced survival compared to Q54 controls. To determine if direct modulation of the pyridoxine pathway could alter the Q54 phenotype, mice were maintained on a pyridoxine-deficient diet for 6 weeks. Dietary pyridoxine deficiency resulted in elevated seizure frequency and decreased survival in Q54 mice compared to control diet. To determine if Hlf could modify other epilepsies, Hlf(KO/+) mice were crossed with the Scn1a(KO/+) Dravet syndrome mouse model to examine the effect on premature lethality. Hlf(KO/+);Scn1a(KO/+) offspring exhibited decreased survival compared to Scn1a(KO/+) controls. Together these results demonstrate that Hlf is a genetic modifier of epilepsy caused by voltage-gated sodium channel mutations and that modulation of the pyridoxine pathway can also influence phenotype severity.

Indexed as

AnimalsBasic-Leucine Zipper Transcription FactorsBrainDietElectroencephalographyEpilepsyKaplan-Meier EstimateMice, Inbred C57BLMice, TransgenicMutationNAV1.1 Voltage-Gated Sodium ChannelPhenotypePyridoxineSeverity of Illness IndexVideo RecordingBasic-Leucine Zipper Transcription FactorsHlf protein, mouseNAV1.1 Voltage-Gated Sodium ChannelPyridoxineScn1a protein, mouseEpilepsyGeneticsMouse modelSeizureVoltage-gated sodium channel

Identifiers

PMID26656780
PMCPMC4698075
OpenAlexW2188006467

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.