Evidence map›Paper›PMID 26656687›Full record

ArticleJournal of virology2016

Crystal Structure of Marburg Virus VP40 Reveals a Broad, Basic Patch for Matrix Assembly and a Requirement of the N-Terminal Domain for Immunosuppression.

Shun-Ichiro Oda, Takeshi Noda, Kaveesha J Wijesinghe, Peter Halfmann, Zachary A Bornholdt, Dafna M Abelson, Tammy Armbrust, Robert V Stahelin, Yoshihiro Kawaoka, Erica Ollmann Saphire

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 45 citations in OpenAlex.

  1. A short history of Auto-Rickshaw.Acta crystallographica. Section D, Structural biology · 2026
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  8. Compound FC-10696 Inhibits Egress of Marburg Virus.Antimicrobial agents and chemotherapy · 2021
    Article
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  12. Review
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  14. Article
  15. Article
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  18. Article
  19. Unveiling a Drift Resistant Cryptotope withinFrontiers in immunology · 2017
    Article
  20. Oligomeric viral proteins: small in size, large in presence.Critical reviews in biochemistry and molecular biology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Shun-Ichiro OdaDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, California, USA.
Takeshi NodaInternational Research Center for Infectious Diseases, Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
Kaveesha J WijesingheDepartment of Chemistry and Biochemistry, the Eck Institute for Global Health, and the Boler-Parsegh Center for Rare and Neglected Diseases, University of Notre Dame, Notre Dame, Indiana, USA.
Peter HalfmannDepartment of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Zachary A BornholdtDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, California, USA.
Dafna M AbelsonDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, California, USA.
Tammy ArmbrustDepartment of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Robert V StahelinDepartment of Chemistry and Biochemistry, the Eck Institute for Global Health, and the Boler-Parsegh Center for Rare and Neglected Diseases, University of Notre Dame, Notre Dame, Indiana, USA Department of Biochemistry & Molecular Biology, Indiana University School of Medicine-South Bend, South Bend, Indiana, USA.
Yoshihiro KawaokaInternational Research Center for Infectious Diseases, Institute of Medical Science, The University of Tokyo, Tokyo, Japan Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, Wisconsin, USA Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
Erica Ollmann SaphireDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, California, USA Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California, USA erica@scripps.edu.
Scripps Research Institute · USUniversity of Notre Dame · USUniversity of Wisconsin–Madison · USNational Institute of Infectious Diseases · JPThe University of Tokyo · JP

Funding

Chemistry-Biochemistry-Biology Training Program at Notre DameT32GM075762 · NIGMS · UNIVERSITY OF NOTRE DAME · PI CHANG, MAYLAND F, MOBASHERY, SHAHRIAR · 2007 to 2021
$3.7M
LIPID-PROTEIN INTERACTIONS IN VIRAL ASSEMBLY AND VIRUS LIKE PARTICLE FORMATIONR01AI081077 · NIAID · PURDUE UNIVERSITY · PI STAHELIN, ROBERT VIRGIL · 2009 to 2019
$3.5M
NIAID NIH HHS R01 AI081077NIGMS NIH HHS T32 GM075762NIGMS NIH HHS T32GM075762
6 · The paper itself

Abstract

unlabelledMarburg virus (MARV), a member of the filovirus family, causes severe hemorrhagic fever with up to 90% lethality. MARV matrix protein VP40 is essential for assembly and release of newly copied viruses and also suppresses immune signaling in the infected cell. Here we report the crystal structure of MARV VP40. We found that MARV VP40 forms a dimer in solution, mediated by N-terminal domains, and that formation of this dimer is essential for budding of virus-like particles. We also found the N-terminal domain to be necessary and sufficient for immune antagonism. The C-terminal domains of MARV VP40 are dispensable for immunosuppression but are required for virus assembly. The C-terminal domains are only 16% identical to those of Ebola virus, differ in structure from those of Ebola virus, and form a distinct broad and flat cationic surface that likely interacts with the cell membrane during virus assembly. IMPORTANCE: Marburg virus, a cousin of Ebola virus, causes severe hemorrhagic fever, with up to 90% lethality seen in recent outbreaks. Molecular structures and visual images of the proteins of Marburg virus are essential for the development of antiviral drugs. One key protein in the Marburg virus life cycle is VP40, which both assembles the virus and suppresses the immune system. Here we provide the molecular structure of Marburg virus VP40, illustrate differences from VP40 of Ebola virus, and reveal surfaces by which Marburg VP40 assembles progeny and suppresses immune function.

Indexed as

Immune ToleranceVirus AssemblyVirus ReleaseAmino Acid SequenceCrystallography, X-RayMarburgvirusModels, MolecularMolecular Sequence DataProtein ConformationProtein MultimerizationSequence AlignmentViral Structural ProteinsViral Structural Proteins

Identifiers

PMID26656687
PMCPMC4733994
OpenAlexW2338351215

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.