Evidence map›Paper›PMID 26656454›Full record

ArticleJournal of the American Heart Association2015

Exome Sequencing Identifies Pathogenic and Modifier Mutations in a Child With Sporadic Dilated Cardiomyopathy.

Pamela A Long, Brandon T Larsen, Jared M Evans, Timothy M Olson

Open access · goldAbstract readCase Reports
In one paragraph

Article in Journal of the American Heart Association, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Whole-Exome Sequencing Identified a Novel Variant (C.405_422+39del) inReports of biochemistry & molecular biology · 2021
    Article
  6. Article
  7. Analysis ofJournal of clinical medicine · 2020
    Article
  8. Article
  9. Review
  10. Article
  11. Pediatric Dilated Cardiomyopathy-AssociatedJournal of the American Heart Association · 2018
    Article
  12. Article
  13. Article
  14. Diagnostic Yield of Whole Exome Sequencing in Pediatric Dilated Cardiomyopathy.Journal of cardiovascular development and disease · 2017
    Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Pamela A LongMayo Graduate School, Molecular Pharmacology and Experimental Therapeutics Track, Mayo Clinic, Rochester, MN (P.A.L.) Cardiovascular Genetics Research Laboratory, Mayo Clinic, Rochester, MN (P.A.L., T.M.O.).
Brandon T LarsenDepartment of Pathology, University of Arizona Medical Center, Tucson, AZ (B.T.L.).
Jared M EvansDivision of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, MN (J.M.E.).
Timothy M OlsonCardiovascular Genetics Research Laboratory, Mayo Clinic, Rochester, MN (P.A.L., T.M.O.) Division of Pediatric Cardiology, Department of Pediatric and Adolescent Medicine, Mayo Clinic, Rochester, MN (T.M.O.) Division of Cardiovascular Diseases, Department of Internal Medicine, Mayo Clinic, Rochester, MN (T.M.O.).
Banner - University Medical Center Tucson · USMayo Clinic · USMayo Clinic in Florida · USWinnMed · US

Funding

Mapping Novel Disease Genes for Dilated CardiomyopathyR01HL071225 · NHLBI · MAYO CLINIC ROCHESTER · PI OLSON, TIMOTHY MARK · 2002 to 2015
$3.6M
Predoctoral Training Program in Molecular PharmacologyT32GM072474 · NIGMS · MAYO CLINIC ROCHESTER · PI KARNITZ, LARRY M · 2005 to 2020
$2.4M
NHLBI NIH HHS R01 HL071225NIGMS NIH HHS T32 GM072474NIGMS NIH HHS T32GM072474
6 · The paper itself

Abstract

backgroundIdiopathic dilated cardiomyopathy (DCM) is typically diagnosed in adulthood, yet familial cases exhibit variable age-dependent penetrance and a subset of patients develop sporadic DCM in childhood. We sought to discover the molecular basis of sporadic DCM in an 11-year-old female with severe heart failure necessitating cardiac transplantation. METHODS AND

resultsParental echocardiograms excluded asymptomatic DCM. Whole exome sequencing was performed on the family trio and filtered for rare, deleterious, recessive, and de novo variants. Of the 8 candidate genes identified, only 2 had a role in cardiac physiology. A de novo missense mutation in TNNT2 was identified, previously reported and functionally validated in familial DCM with markedly variable penetrance. Additionally, recessive compound heterozygous truncating mutations were identified in XIRP2, a member of the ancient Xin gene family, which governs intercalated disc (ICD) maturation. Histomorphological analysis of explanted heart tissue revealed misregistration, mislocalization, and shortening of ICDs, findings similar to Xirp2(-/-) mice.

conclusionsThe synergistic effects of TNNT2 and XIRP2 mutations, resulting in perturbed sarcomeric force generation and transmission, respectively, would account for an early-onset heart failure phenotype. Whereas the importance of Xin proteins in cardiac development has been well established in animal models, this study implicates XIRP2 as a novel modifier gene in the pathogenesis of DCM.

Indexed as

AnimalsCardiomyopathy, DilatedChildDNA-Binding ProteinsExomeFemaleHeart VentriclesHeterozygoteHumansLIM Domain ProteinsMaleMiceMicroscopy, Electron, TransmissionMutation, MissenseNuclear ProteinsOligonucleotide Array Sequence AnalysisDNA-Binding ProteinsLIM Domain ProteinsNuclear ProteinsTNNT2 protein, humanTroponin TXIRP2 protein, humandilated cardiomyopathygeneticsheart failurepediatricswhole exome sequencing

Identifiers

PMID26656454
PMCPMC4845292
OpenAlexW2193861408

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.