Evidence map›Paper›PMID 26656451›Full record

ArticleGenes and immunity

Characterization of KIR intermediate promoters reveals four promoter types associated with distinct expression patterns of KIR subtypes.

H Li, P W Wright, M McCullen, S K Anderson

Open access · bronzeAbstract read
In one paragraph

Article in Genes and immunity. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. TheFrontiers in immunology · 2023
    Article
  6. Genetic variation that determinesProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Article
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  9. Review
  10. Article
  11. Article
  12. Review
  13. Single Nucleotide Polymorphism inFrontiers in immunology · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

H LiBasic Science Program, Leidos Biomedical Research Inc., Frederick National Lab, Frederick, MD, USA.
P W WrightBasic Science Program, Leidos Biomedical Research Inc., Frederick National Lab, Frederick, MD, USA.
M McCullenCancer and Inflammation Program, Center for Cancer Research, National Cancer Institute, Frederick, MD, USA.
S K AndersonBasic Science Program, Leidos Biomedical Research Inc., Frederick National Lab, Frederick, MD, USA.
Leidos Biomedical Research Inc. (United States)Leidos (United States) · USNational Cancer Institute · US

Funding

Molecular Studies of Cellular CytotoxicityZIABC010013 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI ANDERSON, STEPHEN K · 2009 to 2025
$17.2M
MOLECULAR STUDIES OF CELLULAR CYTOTOXICITYZ01BC010013 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI ANDERSON, STEPHEN K · 1996 to 2008
$1.7M
CCR NIH HHS HHSN261200800001CIntramural NIH HHS Z01 BC010013NCI NIH HHS HHSN261200800001E
6 · The paper itself

Abstract

The human killer cell immunoglobulin-like receptor (KIR) genes contain multiple promoters that control the process of gene activation and variegated expression of KIR on natural killer (NK) and T cells. Specific subfamilies of KIR genes have differences in the timing and tissue specificity of expression: however, previous studies of the proximal KIR promoters have not shown significant differences in activity between differentially expressed KIR gene subsets. The recent identification of an intermediate KIR promoter (ProI) associated with KIR2DL1 expression suggested a central role for this element in KIR expression. The current study identifies ProI elements in all of the KIR genes, revealing four classes of ProI that correspond with four distinct expression phenotypes of KIR subgroups: KIR2DL2/S2/L3 that are expressed early in reconstituting NK after transplant; KIR2DL4 that is expressed by CD56-bright NK in a non-variegated manner; KIR3DL3 that is not expressed by circulating NK cells; and the remaining KIR that are expressed by subsets of CD56-dim NK. The four classes of ProI are structurally diverse and display distinct functional properties. Altogether, these results indicate that KIR ProI elements contribute to the tissue/cell-type specificity of KIR transcription and cooperate with the probabilistic proximal promoter to control KIR expression.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticCell Line, TumorHumansReceptors, KIRTranscriptional ActivationTranscription FactorsReceptors, KIRTranscription Factors

Identifiers

PMID26656451
PMCPMC4724278
OpenAlexW2206918556

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.