Evidence map›Paper›PMID 26656423›Full record

ArticlePloS one2015

The TGFβ1 Promoter SNP C-509T and Food Sensitization Promote Esophageal Remodeling in Pediatric Eosinophilic Esophagitis.

Renee Rawson, Arjun Anilkumar, Robert O Newbury, Vineet Bafna, Melissa Aquino, Jacob Palmquist, Hal M Hoffman, James L Mueller, Ranjan Dohil, David H Broide and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Review
  8. Eosinophilic esophagitis: Immune mechanisms and therapeutic targets.Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology · 2022
    Review
  9. Observational
  10. Conserved IFN Signature between Adult and Pediatric Eosinophilic Esophagitis.Journal of immunology (Baltimore, Md. : 1950) · 2021
    Observational
  11. Review
  12. Article
  13. Article
  14. Diagnosis and treatment of eosinophilic esophagitis.The Journal of allergy and clinical immunology · 2020
    Review
  15. Review
  16. Review
  17. Review
  18. Pathophysiology of Eosinophilic Esophagitis.Clinical reviews in allergy & immunology · 2018
    Review
  19. Allergic components of eosinophilic esophagitis.The Journal of allergy and clinical immunology · 2018
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Renee RawsonDivision of Allergy, Immunology, University of California San Diego, La Jolla, California, United States of America.
Arjun AnilkumarDivision of Allergy, Immunology, University of California San Diego, La Jolla, California, United States of America.
Robert O NewburyDepartment of Pediatrics, University of California San Diego, La Jolla, California, Rady Children's Hospital, San Diego, California, United States of America.
Vineet BafnaDepartment of Computer Science and Engineering, University of California, San Diego, La Jolla, California.
Melissa AquinoDivision of Allergy, Immunology, University of California San Diego, La Jolla, California, United States of America.
Jacob PalmquistDivision of Allergy, Immunology, University of California San Diego, La Jolla, California, United States of America.
Hal M HoffmanDivision of Allergy, Immunology, University of California San Diego, La Jolla, California, United States of America.
James L MuellerDivision of Allergy, Immunology, University of California San Diego, La Jolla, California, United States of America.
Ranjan DohilDivision of Pediatric Gastroenterology and Nutrition, University of California San Diego, La Jolla, California, Rady Children's Hospital, San Diego, California, United States of America.
David H BroideDivision of Allergy, Immunology, University of California San Diego, La Jolla, California, United States of America.
Seema S AcevesDivision of Allergy, Immunology, University of California San Diego, La Jolla, California, United States of America.
University of California, San Diego · USRady Children's Hospital-San Diego · US

Funding

UC San Diego Clinical and Translational Research InstituteUL1TR001442 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIRESTEIN, GARY S, HOGARTH, MICHAEL · 2015 to 2024
$88.3M
TRM and airway inflammation and remodelingU19AI070535 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BROIDE, DAVID H · 2006 to 2025
$34.2M
San Diego Clinical and Translational Research InstituteUL1TR000100 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIRESTEIN, GARY S · 2012 to 2015
$19.7M
TRAINING (CAREER DEVELOPMENT) COMPONENTU54AI117804 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI GLENN T FURUTA, Marc E. Rothenberg · 2014 to 2026
$18.5M
Chromosome 17q, allergic inflammation, and remodelingR01AI107779 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BROIDE, DAVID H · 2013 to 2024
$4.7M
Mechanisms of tissue damage leading to chronic allergic eosinophilic esophagitisR01AI092135 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ACEVES, SEEMA S · 2011 to 2020
$4.4M
Siglec-F and Resolution of Allergic InflammationR01AI072115 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BROIDE, DAVID H · 2008 to 2012
$1.7M
Contribution of rigid matrix to allergic eosinophilic esophagitis pathogenesisR56AI092135 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ACEVES, SEEMA S · 2023 to 2023
$198k
NCATS NIH HHS UL1 TR000100NCATS NIH HHS UL1TR000100NCATS NIH HHS UL1 TR001442NCATS NIH HHS UL1TR001442NIAID NIH HHS AI 092135NIAID NIH HHS AI 107779NIAID NIH HHS AI 70535NIAID NIH HHS AI 72115NIAID NIH HHS R01 AI072115NIAID NIH HHS R01 AI092135NIAID NIH HHS R01 AI107779NIAID NIH HHS R56 AI092135NIAID NIH HHS U19 AI070535NIAID NIH HHS U54 AI117804
6 · The paper itself

Abstract

backgroundEosinophilic esophagitis (EoE) is a chronic antigen mediated disease associated with substantial esophageal remodeling and fibrosis. The functional TGFβ1 promoter SNP C-509 associates with renal fibrosis and asthma. The effect of TGFβ1 genotype and EoE severity or potential gene-environment interactions have not been previously reported in EoE.

methodsGenotype at TGFβ1 C-509T and remodeling was analyzed in 144 subjects with EoE. The severity of remodeling and inflammation was analyzed in the context of IgE sensitization to food antigens and C-509T genotype.

resultsThe TGFβ1 promoter C-509 genotypes CC, CT, and TT were 35%, 52%, and 13%, respectively. Sixty-six percent of subjects were sensitized to foods by positive skin prick test (SPT) or serum specific IgE. TT genotype subjects had significantly more TGFβ1 (CC subjects = 1300 per mm2; TT = 2250 per mm2) (p<0.05) and tryptase (CC subjects = 145 per mm2: TT = 307 per mm2) (p<0.05) positive cells and higher epithelial remodeling scores (2.4 vs 3.7, p<0.001) than CC subjects. The differences in TGFβ1 and tryptase positive cells as well as fibrosis were significantly increased when there was concurrent food sensitization. Food sensitization alone did not associate with any parameters of inflammation or remodeling.

conclusionsOur data support a gene-environment interaction between food and genotype at C-509 that modulates disease severity in EoE. Since EoE subjects often continue to consume foods to which they are sensitized, these findings may have clinical relevance for disease management.

Indexed as

Polymorphism, Single NucleotidePromoter Regions, GeneticChildChild, PreschoolEosinophilic EsophagitisEsophagusFemaleGene-Environment InteractionGenotypeHumansImmunoglobulin EInflammationSeverity of Illness IndexTransforming Growth Factor beta1Immunoglobulin ETransforming Growth Factor beta1

Identifiers

PMID26656423
PMCPMC4678166
OpenAlexW2221281403

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.