Evidence map›Paper›PMID 26655715›Full record

ArticleThe Journal of biological chemistry2016

Lipooligosaccharide Structures of Invasive and Carrier Isolates of Neisseria meningitidis Are Correlated with Pathogenicity and Carriage.

Constance M John, Nancy J Phillips, Richard Din, Mingfeng Liu, Einar Rosenqvist, E Arne Høiby, Daniel C Stein, Gary A Jarvis

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Predominant phosphorylation patterns inJournal of lipid research · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Structure-Activity Relationship ofFrontiers in immunology · 2017
    Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Constance M JohnFrom the Center for Immunochemistry, Veterans Affairs Medical Center, San Francisco, California 94121, the Departments of Laboratory Medicine and.
Nancy J Phillipsthe Departments of Laboratory Medicine and.
Richard DinFrom the Center for Immunochemistry, Veterans Affairs Medical Center, San Francisco, California 94121.
Mingfeng LiuFrom the Center for Immunochemistry, Veterans Affairs Medical Center, San Francisco, California 94121, the Departments of Laboratory Medicine and.
Einar Rosenqvistthe Norwegian Institute of Public Health, P. O. Box 4404, Nydalen, 0403 Oslo, Norway, and.
E Arne Høibythe Norwegian Institute of Public Health, P. O. Box 4404, Nydalen, 0403 Oslo, Norway, and.
Daniel C Steinthe Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742.
Gary A JarvisFrom the Center for Immunochemistry, Veterans Affairs Medical Center, San Francisco, California 94121, the Departments of Laboratory Medicine and gary.jarvis@ucsf.edu.
San Francisco VA Medical Center · USNorwegian Institute of Public Health · NOUniversity of California, San Francisco · USUniversity of Maryland, College Park · US

Funding

Translational InformaticsP30CA082103 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jennifer Leigh Clarke · 1999 to 2026
$209.7M
Structural Characterization of Polypeptides, Protein Complexes, OligosaccharidesS10RR029446 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WITKOWSKA, H. EWA · 2010 to 2010
$1.0M
Targeting of LOS for Treatment of Antibiotic-Resistant Neisseria gonorrhoeaeI01BX000727 · VA · VETERANS AFFAIRS MED CTR SAN FRANCISCO · PI JARVIS, GARY A · 2011 to 2025
–
BLRD VA I01 BX000727NCI NIH HHS P30 CA082103NCRR NIH HHS S10 RR029446
6 · The paper itself

Abstract

The degree of phosphorylation and phosphoethanolaminylation of lipid A on neisserial lipooligosaccharide (LOS), a major cell-surface antigen, can be correlated with inflammatory potential and the ability to induce immune tolerance in vitro. On the oligosaccharide of the LOS, the presence of phosphoethanolamine and sialic acid substituents can be correlated with in vitro serum resistance. In this study, we analyzed the structure of the LOS from 40 invasive isolates and 25 isolates from carriers of Neisseria meningitidis without disease. Invasive strains were classified as groups 1-3 that caused meningitis, septicemia without meningitis, and septicemia with meningitis, respectively. Intact LOS was analyzed by high resolution matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Prominent peaks for lipid A fragment ions with three phosphates and one phosphoethanolamine were detected in all LOS analyzed. LOS from groups 2 and 3 had less abundant ions for highly phosphorylated lipid A forms and induced less TNF-α in THP-1 monocytic cells compared with LOS from group 1. Lipid A from all invasive strains was hexaacylated, whereas lipid A of 6/25 carrier strains was pentaacylated. There were fewer O-acetyl groups and more phosphoethanolamine and sialic acid substitutions on the oligosaccharide from invasive compared with carrier isolates. Bioinformatic and genomic analysis of LOS biosynthetic genes indicated significant skewing to specific alleles, dependent on the disease outcome. Our results suggest that variable LOS structures have multifaceted effects on homeostatic innate immune responses that have critical impact on the pathophysiology of meningococcal infections.

Indexed as

AcylationAdolescentAntigens, BacterialCarrier StateCell Line, TumorComputational BiologyGene Expression ProfilingHumansImmunity, InnateLipopolysaccharidesMeningitis, MeningococcalMeningococcal InfectionsMolecular StructureMonocytesNeisseria meningitidis, Serogroup BNeisseria meningitidis, Serogroup CAntigens, Bacteriallipid-linked oligosaccharidesLipopolysaccharidesTNF protein, humanTumor Necrosis Factor-alphaacylationbioinformaticsinfectionlipid Alipooligosaccharidemass spectrometry (MS)Neisseria meningitidisphosphoethanolaminephosphorylationsialic acid

Identifiers

PMID26655715
PMCPMC4751370
OpenAlexW2264086687

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.