Evidence map›Paper›PMID 26655602›Full record

ArticleBiochimica et biophysica acta2016

Metabolism of (13)C5-hydroxyproline in mouse models of Primary Hyperoxaluria and its inhibition by RNAi therapeutics targeting liver glycolate oxidase and hydroxyproline dehydrogenase.

Xingsheng Li, John Knight, Sonia Fargue, Brianna Buchalski, Zhengrong Guan, Edward W Inscho, Abigail Liebow, Kevin Fitzgerald, William Querbes, W Todd Lowther and 1 more

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Dysfunctional peroxisomal lipid metabolisms and their ocular manifestations.Frontiers in cell and developmental biology · 2022
    Review
  6. Article
  7. Novel therapeutic approaches for the primary hyperoxalurias.Pediatric nephrology (Berlin, Germany) · 2021
    Review
  8. Review
  9. Opportunities and challenges for antisense oligonucleotide therapies.Journal of inherited metabolic disease · 2021
    Review
  10. Effect of alanine supplementation on oxalate synthesis.Biochimica et biophysica acta. Molecular basis of disease · 2021
    Article
  11. Urinary Amine Metabolomics Characterization with Custom 12-Plex Isobaric DiLeu Labeling.Journal of the American Society for Mass Spectrometry · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Substrate reduction therapy for inborn errors of metabolism.Emerging topics in life sciences · 2019
    Article
  16. Review
  17. Review
  18. Hydroxyproline Metabolism and Oxalate Synthesis in Primary Hyperoxaluria.Journal of the American Society of Nephrology : JASN · 2018
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Xingsheng LiDepartment of Urology, University of Alabama at Birmingham, Birmingham, AL 35294, United States.
John KnightDepartment of Urology, University of Alabama at Birmingham, Birmingham, AL 35294, United States.
Sonia FargueDepartment of Urology, University of Alabama at Birmingham, Birmingham, AL 35294, United States.
Brianna BuchalskiDepartment of Urology, University of Alabama at Birmingham, Birmingham, AL 35294, United States.
Zhengrong GuanDivision of Nephrology, Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, United States.
Edward W InschoDivision of Nephrology, Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, United States.
Abigail LiebowAlnylam Pharmaceuticals, Cambridge, MA, United States.
Kevin FitzgeraldAlnylam Pharmaceuticals, Cambridge, MA, United States.
William QuerbesAlnylam Pharmaceuticals, Cambridge, MA, United States.
W Todd LowtherDepartment of Biochemistry, Wake Forest School of Medicine, Winston-Salem, NC 27157, United States.
Ross P HolmesDepartment of Urology, University of Alabama at Birmingham, Birmingham, AL 35294, United States. Electronic address: rholmes@uab.edu.
University of Alabama at Birmingham · USAlnylam Pharmaceuticals (United States) · USUniversity of Alabama at Birmingham Hospital · USWake Forest University · US

Funding

UAB-UCSD O'Brien Core Center for Acute Kidney Injury ResearchP30DK079337 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI AGARWAL, ANUPAM · 2008 to 2022
$18.3M
UAB Recessive PKD Research and Translational Core CenterP30DK074038 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YODER, BRADLEY K. · 2005 to 2019
$16.6M
Mitochondrial Metabolism in Primary HyperoxaluriaR01DK054468 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HOLMES, ROSS P · 1999 to 2017
$4.1M
The Inflammatory Cytokines, MCP-1 and TGF-Beta, Mediate Renal Autoregulatory ImpaR01HL098135 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI INSCHO, EDWARD W · 2010 to 2014
$1.8M
Hydroxproline Catabolism and HyperoxaluriaR01DK083527 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HOLMES, ROSS P, LOWTHER, W TODD · 2010 to 2012
$753k
NHLBI NIH HHS R01 HL098135NIDDK NIH HHS P30 DK074038NIDDK NIH HHS P30 DK079337NIDDK NIH HHS R01 DK054468NIDDK NIH HHS R01 DK083527
6 · The paper itself

Abstract

Excessive endogenous oxalate synthesis can result in calcium oxalate kidney stone formation and renal failure. Hydroxyproline catabolism in the liver and kidney contributes to endogenous oxalate production in mammals. To quantify this contribution we have infused Wt mice, Agxt KO mice deficient in liver alanine:glyoxylate aminotransferase, and Grhpr KO mice deficient in glyoxylate reductase, with (13)C5-hydroxyproline. The contribution of hydroxyproline metabolism to urinary oxalate excretion in Wt mice was 22±2%, 42±8% in Agxt KO mice, and 36%±9% in Grhpr KO mice. To determine if blocking steps in hydroxyproline and glycolate metabolism would decrease urinary oxalate excretion, mice were injected with siRNA targeting the liver enzymes glycolate oxidase and hydroxyproline dehydrogenase. These siRNAs decreased the expression of both enzymes and reduced urinary oxalate excretion in Agxt KO mice, when compared to mice infused with a luciferase control preparation. These results suggest that siRNA approaches could be useful for decreasing the oxalate burden on the kidney in individuals with Primary Hyperoxaluria.

Indexed as

RNAi TherapeuticsAlcohol OxidoreductasesAnimalsDisease Models, AnimalHydroxyprolineHyperoxaluria, PrimaryLiverMaleMiceMice, Inbred C57BLOxalatesProline OxidaseRNA, Small InterferingAlcohol Oxidoreductasesglycollate oxidaseHydroxyprolineOxalatesProline OxidaseRNA, Small Interfering

Identifiers

PMID26655602
PMCPMC4706777
OpenAlexW2186390246

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.