Evidence map›Paper›PMID 26655471›Full record

ArticleStructure (London, England : 1993)2015

OprG Harnesses the Dynamics of its Extracellular Loops to Transport Small Amino Acids across the Outer Membrane of Pseudomonas aeruginosa.

Iga Kucharska, Patrick Seelheim, Thomas Edrington, Binyong Liang, Lukas K Tamm

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Outer membrane permeability: Antimicrobials and diverse nutrients bypass porins inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. Article
  6. Review
  7. A β-barrel for oil transport through lipid membranes: Dynamic NMR structures of AlkL.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Proteomic Response ofFrontiers in microbiology · 2017
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Iga KucharskaDepartment of Molecular Physiology and Biological Physics, Center for Membrane Biology, University of Virginia, Charlottesville, VA 22908, USA.
Patrick SeelheimDepartment of Molecular Physiology and Biological Physics, Center for Membrane Biology, University of Virginia, Charlottesville, VA 22908, USA.
Thomas EdringtonDepartment of Molecular Physiology and Biological Physics, Center for Membrane Biology, University of Virginia, Charlottesville, VA 22908, USA.
Binyong LiangDepartment of Molecular Physiology and Biological Physics, Center for Membrane Biology, University of Virginia, Charlottesville, VA 22908, USA.
Lukas K TammDepartment of Molecular Physiology and Biological Physics, Center for Membrane Biology, University of Virginia, Charlottesville, VA 22908, USA. Electronic address: lkt2e@virginia.edu.
University of Virginia · US

Funding

Structure, Assembly, and Function of Outer Membrane ProteinsR01GM051329 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI TAMM, LUKAS K · 1997 to 2018
$6.4M
NIGMS NIH HHS R01 GM051329
6 · The paper itself

Abstract

OprG is an outer membrane protein of Pseudomonas aeruginosa whose function as an antibiotic-sensitive porin has been controversial and not well defined. Circumstantial evidence led to the proposal that OprG might transport hydrophobic compounds by using a lateral gate in the barrel wall thought to be lined by three conserved prolines. To test this hypothesis and to find the physiological substrates of OprG, we reconstituted the purified protein into liposomes and found it to facilitate the transport of small amino acids such as glycine, alanine, valine, and serine, which was confirmed by Pseudomonas growth assays. The structures of wild-type and a critical proline mutant were determined by nuclear magnetic resonance in dihexanoyl-phosphatidylcholine micellar solutions. Both proteins formed eight-stranded β-barrels with flexible extracellular loops. The interfacial prolines did not form a lateral gate in these structures, but loop 3 exhibited restricted motions in the inactive P92A mutant but not in wild-type OprG.

Indexed as

Amino AcidsAmino Acid SequenceBacterial Outer Membrane ProteinsConserved SequenceMolecular Sequence DataMutationProtein BindingProtein Structure, TertiaryAmino AcidsBacterial Outer Membrane ProteinsOprG protein, Pseudomonas aeruginosa

Identifiers

PMID26655471
PMCPMC4699568
OpenAlexW2176057246

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.